Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.95■□□□□ 0.62
COL1A1P02452 AC099398.1-201ENST00000567919 2776 ntBASIC18.95■□□□□ 0.62
COL1A1P02452 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.95■□□□□ 0.62
COL1A1P02452 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL1A1P02452 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL1A1P02452 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL1A1P02452 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL1A1P02452 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.95■□□□□ 0.62
COL1A1P02452 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.95■□□□□ 0.62
COL1A1P02452 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.95■□□□□ 0.62
COL1A1P02452 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.95■□□□□ 0.62
COL1A1P02452 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
COL1A1P02452 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.95■□□□□ 0.62
COL1A1P02452 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.95■□□□□ 0.62
COL1A1P02452 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL1A1P02452 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.95■□□□□ 0.62
COL1A1P02452 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
COL1A1P02452 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 AL118508.1-201ENST00000613502 2345 ntBASIC18.94■□□□□ 0.62
COL1A1P02452 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL1A1P02452 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.94■□□□□ 0.62
COL1A1P02452 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.94■□□□□ 0.62
COL1A1P02452 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.94■□□□□ 0.62
COL1A1P02452 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.94■□□□□ 0.62
COL1A1P02452 BCYRN1-201ENST00000418539 200 ntBASIC18.94■□□□□ 0.62
COL1A1P02452 AL355864.2-201ENST00000447420 863 ntBASIC18.94■□□□□ 0.62
COL1A1P02452 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.94■□□□□ 0.62
COL1A1P02452 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 AC022188.1-201ENST00000620960 1664 ntBASIC18.94■□□□□ 0.62
COL1A1P02452 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 AC010491.1-201ENST00000563101 2797 ntBASIC18.94■□□□□ 0.62
COL1A1P02452 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.94■□□□□ 0.62
COL1A1P02452 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.94■□□□□ 0.62
COL1A1P02452 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL1A1P02452 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL1A1P02452 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.93■□□□□ 0.62
COL1A1P02452 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL1A1P02452 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.93■□□□□ 0.62
COL1A1P02452 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.93■□□□□ 0.62
COL1A1P02452 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.93■□□□□ 0.62
COL1A1P02452 AC012441.1-201ENST00000446669 685 ntBASIC18.93■□□□□ 0.62
COL1A1P02452 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.93■□□□□ 0.62
COL1A1P02452 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 AC099548.2-209ENST00000480264 625 ntBASIC18.93■□□□□ 0.62
COL1A1P02452 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.93■□□□□ 0.62
COL1A1P02452 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.93■□□□□ 0.62
COL1A1P02452 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL1A1P02452 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.93■□□□□ 0.62
COL1A1P02452 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL1A1P02452 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.93■□□□□ 0.62
COL1A1P02452 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL1A1P02452 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
COL1A1P02452 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.92■□□□□ 0.62
COL1A1P02452 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.92■□□□□ 0.62
COL1A1P02452 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.92■□□□□ 0.62
COL1A1P02452 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL1A1P02452 BRWD1P1-201ENST00000401091 371 ntBASIC18.92■□□□□ 0.62
COL1A1P02452 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.92■□□□□ 0.62
COL1A1P02452 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.92■□□□□ 0.62
COL1A1P02452 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.92■□□□□ 0.62
COL1A1P02452 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.92■□□□□ 0.62
COL1A1P02452 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL1A1P02452 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COL1A1P02452 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.92■□□□□ 0.62
COL1A1P02452 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COL1A1P02452 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL1A1P02452 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL1A1P02452 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
COL1A1P02452 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms