Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CDRT1O95170 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.32□□□□□ -0.12
CDRT1O95170 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDRT1O95170 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CDRT1O95170 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.32□□□□□ -0.12
CDRT1O95170 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 MTDHP3-201ENST00000594186 672 ntBASIC14.32□□□□□ -0.12
CDRT1O95170 AC091076.1-201ENST00000610741 619 ntBASIC14.32□□□□□ -0.12
CDRT1O95170 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.32□□□□□ -0.12
CDRT1O95170 REXO1L3P-201ENST00000622202 1288 ntBASIC14.32□□□□□ -0.12
CDRT1O95170 AL139288.1-201ENST00000623748 933 ntBASIC14.32□□□□□ -0.12
CDRT1O95170 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDRT1O95170 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.32□□□□□ -0.12
CDRT1O95170 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 SLC22A20-204ENST00000530038 1673 ntBASIC14.32□□□□□ -0.12
CDRT1O95170 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.32□□□□□ -0.12
CDRT1O95170 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 AC005912.2-201ENST00000619492 2400 ntBASIC14.32□□□□□ -0.12
CDRT1O95170 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDRT1O95170 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDRT1O95170 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.32□□□□□ -0.12
CDRT1O95170 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.31□□□□□ -0.12
CDRT1O95170 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 AC092127.1-201ENST00000567093 3455 ntBASIC14.31□□□□□ -0.12
CDRT1O95170 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDRT1O95170 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDRT1O95170 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
CDRT1O95170 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.31□□□□□ -0.12
CDRT1O95170 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.31□□□□□ -0.12
CDRT1O95170 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.31□□□□□ -0.12
CDRT1O95170 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.31□□□□□ -0.12
CDRT1O95170 KRT18P35-201ENST00000510488 1269 ntBASIC14.31□□□□□ -0.12
CDRT1O95170 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CDRT1O95170 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.31□□□□□ -0.12
CDRT1O95170 AL589182.2-201ENST00000619332 1049 ntBASIC14.31□□□□□ -0.12
CDRT1O95170 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.31□□□□□ -0.12
CDRT1O95170 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDRT1O95170 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.31□□□□□ -0.12
CDRT1O95170 U82695.1-201ENST00000635752 1889 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms