Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SOX1O00570 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SOX1O00570 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.73■□□□□ 0.27
SOX1O00570 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 RPL7P35-201ENST00000446943 740 ntBASIC16.73■□□□□ 0.27
SOX1O00570 AL353637.1-201ENST00000451571 732 ntBASIC16.73■□□□□ 0.27
SOX1O00570 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.73■□□□□ 0.27
SOX1O00570 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.73■□□□□ 0.27
SOX1O00570 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.73■□□□□ 0.27
SOX1O00570 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.73■□□□□ 0.27
SOX1O00570 DNM1P30-201ENST00000563586 452 ntBASIC16.73■□□□□ 0.27
SOX1O00570 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.73■□□□□ 0.27
SOX1O00570 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.73■□□□□ 0.27
SOX1O00570 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.73■□□□□ 0.27
SOX1O00570 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.73■□□□□ 0.27
SOX1O00570 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SOX1O00570 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.73■□□□□ 0.27
SOX1O00570 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SOX1O00570 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.73■□□□□ 0.27
SOX1O00570 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SOX1O00570 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX1O00570 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SOX1O00570 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SOX1O00570 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SOX1O00570 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SOX1O00570 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.72■□□□□ 0.27
SOX1O00570 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SOX1O00570 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SOX1O00570 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.72■□□□□ 0.27
SOX1O00570 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SOX1O00570 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.72■□□□□ 0.27
SOX1O00570 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX1O00570 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX1O00570 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.72■□□□□ 0.27
SOX1O00570 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SOX1O00570 AL031731.1-201ENST00000642131 2094 ntBASIC16.72■□□□□ 0.27
SOX1O00570 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX1O00570 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX1O00570 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SOX1O00570 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX1O00570 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX1O00570 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SOX1O00570 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
SOX1O00570 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.71■□□□□ 0.27
SOX1O00570 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX1O00570 RPS9P1-201ENST00000419943 583 ntBASIC16.71■□□□□ 0.27
SOX1O00570 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 RNMTL1P1-201ENST00000454103 560 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms