Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 ST20-AS1-201ENST00000560255 4223 ntBASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC093909.1-201ENST00000504731 1122 ntBASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL160237.2-201ENST00000556165 472 ntBASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC104692.2-201ENST00000603054 253 ntBASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL645728.2-201ENST00000641974 660 ntBASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 VN2R19P-201ENST00000442399 1052 ntBASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL031432.2-201ENST00000566714 459 ntBASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL928711.1-201ENST00000570165 459 ntBASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC116407.3-201ENST00000623905 1129 ntBASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF103-CHMP3A0A140T963 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 MRPL3P1-201ENST00000400109 1033 ntBASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 IGLL3P-201ENST00000412472 434 ntBASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC009947.1-201ENST00000444350 727 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms