Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR6724-3-201ENST00000622482 92 ntBASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
PDLIM7Q9NR12 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.58■■□□□ 1.85
PDLIM7Q9NR12 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDLIM7Q9NR12 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PDLIM7Q9NR12 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
PDLIM7Q9NR12 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.58■■□□□ 1.85
PDLIM7Q9NR12 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 AC133561.4-201ENST00000566112 224 ntBASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDLIM7Q9NR12 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDLIM7Q9NR12 AC092803.2-201ENST00000564287 1899 ntBASIC26.56■■□□□ 1.84
PDLIM7Q9NR12 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
PDLIM7Q9NR12 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.56■■□□□ 1.84
PDLIM7Q9NR12 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDLIM7Q9NR12 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.56■■□□□ 1.84
PDLIM7Q9NR12 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PDLIM7Q9NR12 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.55■■□□□ 1.84
PDLIM7Q9NR12 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDLIM7Q9NR12 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.55■■□□□ 1.84
PDLIM7Q9NR12 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.55■■□□□ 1.84
PDLIM7Q9NR12 AC096887.2-201ENST00000623443 1957 ntBASIC26.55■■□□□ 1.84
PDLIM7Q9NR12 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PDLIM7Q9NR12 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.54■■□□□ 1.84
PDLIM7Q9NR12 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.54■■□□□ 1.84
PDLIM7Q9NR12 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.54■■□□□ 1.84
PDLIM7Q9NR12 MTDHP2-201ENST00000601468 714 ntBASIC26.54■■□□□ 1.84
PDLIM7Q9NR12 AL356740.2-201ENST00000601559 647 ntBASIC26.54■■□□□ 1.84
PDLIM7Q9NR12 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
PDLIM7Q9NR12 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
PDLIM7Q9NR12 AC092666.2-201ENST00000613287 246 ntBASIC26.53■■□□□ 1.84
PDLIM7Q9NR12 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.53■■□□□ 1.84
PDLIM7Q9NR12 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDLIM7Q9NR12 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.53■■□□□ 1.84
PDLIM7Q9NR12 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
PDLIM7Q9NR12 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PDLIM7Q9NR12 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDLIM7Q9NR12 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDLIM7Q9NR12 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.52■■□□□ 1.84
PDLIM7Q9NR12 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
PDLIM7Q9NR12 RARRES2P6-201ENST00000567333 442 ntBASIC26.52■■□□□ 1.84
PDLIM7Q9NR12 AC010501.1-201ENST00000606270 1962 ntBASIC26.52■■□□□ 1.84
PDLIM7Q9NR12 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PDLIM7Q9NR12 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.51■■□□□ 1.83
PDLIM7Q9NR12 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.51■■□□□ 1.83
PDLIM7Q9NR12 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.51■■□□□ 1.83
PDLIM7Q9NR12 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDLIM7Q9NR12 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PDLIM7Q9NR12 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDLIM7Q9NR12 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDLIM7Q9NR12 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PDLIM7Q9NR12 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDLIM7Q9NR12 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDLIM7Q9NR12 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDLIM7Q9NR12 AC091060.1-201ENST00000623524 1766 ntBASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 ZNRF2P3-201ENST00000424200 374 ntBASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 AL512631.2-201ENST00000604634 923 ntBASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.49■■□□□ 1.83
PDLIM7Q9NR12 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.48■■□□□ 1.83
PDLIM7Q9NR12 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDLIM7Q9NR12 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDLIM7Q9NR12 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDLIM7Q9NR12 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.47■■□□□ 1.83
PDLIM7Q9NR12 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDLIM7Q9NR12 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDLIM7Q9NR12 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.46■■□□□ 1.83
PDLIM7Q9NR12 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDLIM7Q9NR12 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDLIM7Q9NR12 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PDLIM7Q9NR12 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.45■■□□□ 1.83
PDLIM7Q9NR12 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDLIM7Q9NR12 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.45■■□□□ 1.82
PDLIM7Q9NR12 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.45■■□□□ 1.82
PDLIM7Q9NR12 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.45■■□□□ 1.82
PDLIM7Q9NR12 DUSP8P4-201ENST00000399538 1761 ntBASIC26.45■■□□□ 1.82
PDLIM7Q9NR12 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDLIM7Q9NR12 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms