Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42EP4Q9H3Q1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42EP4Q9H3Q1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42EP4Q9H3Q1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42EP4Q9H3Q1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42EP4Q9H3Q1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42EP4Q9H3Q1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42EP4Q9H3Q1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42EP4Q9H3Q1 AC025884.2-201ENST00000553429 711 ntBASIC23.89■■□□□ 1.41
CDC42EP4Q9H3Q1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.89■■□□□ 1.41
CDC42EP4Q9H3Q1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42EP4Q9H3Q1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42EP4Q9H3Q1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42EP4Q9H3Q1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42EP4Q9H3Q1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42EP4Q9H3Q1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42EP4Q9H3Q1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42EP4Q9H3Q1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42EP4Q9H3Q1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42EP4Q9H3Q1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42EP4Q9H3Q1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CDC42EP4Q9H3Q1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42EP4Q9H3Q1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42EP4Q9H3Q1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CDC42EP4Q9H3Q1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.86■■□□□ 1.41
CDC42EP4Q9H3Q1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42EP4Q9H3Q1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42EP4Q9H3Q1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42EP4Q9H3Q1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42EP4Q9H3Q1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42EP4Q9H3Q1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42EP4Q9H3Q1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.85■■□□□ 1.41
CDC42EP4Q9H3Q1 HLA-L-211ENST00000482052 1765 ntBASIC23.85■■□□□ 1.41
CDC42EP4Q9H3Q1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42EP4Q9H3Q1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.84■■□□□ 1.41
CDC42EP4Q9H3Q1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42EP4Q9H3Q1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDC42EP4Q9H3Q1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CDC42EP4Q9H3Q1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CDC42EP4Q9H3Q1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.83■■□□□ 1.41
CDC42EP4Q9H3Q1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.83■■□□□ 1.41
CDC42EP4Q9H3Q1 MIR3960-201ENST00000583311 91 ntBASIC23.83■■□□□ 1.41
CDC42EP4Q9H3Q1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CDC42EP4Q9H3Q1 C9orf163-202ENST00000624034 2573 ntBASIC23.82■■□□□ 1.4
CDC42EP4Q9H3Q1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42EP4Q9H3Q1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDC42EP4Q9H3Q1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDC42EP4Q9H3Q1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.82■■□□□ 1.4
CDC42EP4Q9H3Q1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.82■■□□□ 1.4
CDC42EP4Q9H3Q1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDC42EP4Q9H3Q1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 AC079834.2-201ENST00000609776 1949 ntBASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 MIR3648-2-201ENST00000581792 180 ntBASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 MIR3648-1-201ENST00000615959 180 ntBASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CDC42EP4Q9H3Q1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.79■■□□□ 1.4
CDC42EP4Q9H3Q1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CDC42EP4Q9H3Q1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42EP4Q9H3Q1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42EP4Q9H3Q1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42EP4Q9H3Q1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42EP4Q9H3Q1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42EP4Q9H3Q1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42EP4Q9H3Q1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms