Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD6Q8TD26 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.84■■□□□ 1.09
CHD6Q8TD26 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD6Q8TD26 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.84■■□□□ 1.09
CHD6Q8TD26 DUX4L19-201ENST00000557448 1267 ntBASIC21.84■■□□□ 1.09
CHD6Q8TD26 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.84■■□□□ 1.09
CHD6Q8TD26 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD6Q8TD26 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD6Q8TD26 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.83■■□□□ 1.09
CHD6Q8TD26 CD99P1-205ENST00000527459 561 ntBASIC21.83■■□□□ 1.09
CHD6Q8TD26 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHD6Q8TD26 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHD6Q8TD26 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD6Q8TD26 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.82■■□□□ 1.08
CHD6Q8TD26 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CHD6Q8TD26 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD6Q8TD26 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHD6Q8TD26 AC123595.1-201ENST00000440769 1046 ntBASIC21.81■■□□□ 1.08
CHD6Q8TD26 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD6Q8TD26 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD6Q8TD26 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD6Q8TD26 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHD6Q8TD26 AC099791.1-201ENST00000416440 715 ntBASIC21.8■■□□□ 1.08
CHD6Q8TD26 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CHD6Q8TD26 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD6Q8TD26 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD6Q8TD26 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHD6Q8TD26 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHD6Q8TD26 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.79■■□□□ 1.08
CHD6Q8TD26 AL499627.2-201ENST00000606283 725 ntBASIC21.79■■□□□ 1.08
CHD6Q8TD26 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD6Q8TD26 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD6Q8TD26 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD6Q8TD26 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD6Q8TD26 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHD6Q8TD26 SERBP1P1-201ENST00000396021 1160 ntBASIC21.79■■□□□ 1.08
CHD6Q8TD26 AC080038.1-201ENST00000611274 1154 ntBASIC21.78■■□□□ 1.08
CHD6Q8TD26 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD6Q8TD26 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD6Q8TD26 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD6Q8TD26 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.78■■□□□ 1.08
CHD6Q8TD26 AC011298.3-201ENST00000615796 283 ntBASIC21.78■■□□□ 1.08
CHD6Q8TD26 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD6Q8TD26 AF131216.4-201ENST00000638924 1588 ntBASIC21.77■■□□□ 1.08
CHD6Q8TD26 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHD6Q8TD26 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
CHD6Q8TD26 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.77■■□□□ 1.08
CHD6Q8TD26 AC026185.1-201ENST00000445748 174 ntBASIC21.76■■□□□ 1.07
CHD6Q8TD26 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD6Q8TD26 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD6Q8TD26 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD6Q8TD26 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHD6Q8TD26 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD6Q8TD26 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CHD6Q8TD26 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.76■■□□□ 1.07
CHD6Q8TD26 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CHD6Q8TD26 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD6Q8TD26 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD6Q8TD26 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD6Q8TD26 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CHD6Q8TD26 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD6Q8TD26 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHD6Q8TD26 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD6Q8TD26 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHD6Q8TD26 AL355802.2-201ENST00000402069 882 ntBASIC21.75■■□□□ 1.07
CHD6Q8TD26 CDCA4P2-201ENST00000441182 718 ntBASIC21.75■■□□□ 1.07
CHD6Q8TD26 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.75■■□□□ 1.07
CHD6Q8TD26 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD6Q8TD26 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD6Q8TD26 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.74■■□□□ 1.07
CHD6Q8TD26 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD6Q8TD26 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD6Q8TD26 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD6Q8TD26 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD6Q8TD26 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CHD6Q8TD26 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD6Q8TD26 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD6Q8TD26 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD6Q8TD26 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD6Q8TD26 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD6Q8TD26 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD6Q8TD26 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD6Q8TD26 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD6Q8TD26 AC142086.2-201ENST00000569753 217 ntBASIC21.72■■□□□ 1.07
CHD6Q8TD26 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD6Q8TD26 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD6Q8TD26 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD6Q8TD26 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.71■■□□□ 1.07
CHD6Q8TD26 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 255.3 ms