Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 AC142472.1-201ENST00000612013 1741 ntBASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GFI1BQ5VTD9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 AL121603.2-201ENST00000557373 2117 ntBASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GFI1BQ5VTD9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.16■□□□□ 0.5
GFI1BQ5VTD9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 ABHD17AP4-201ENST00000411545 909 ntBASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GFI1BQ5VTD9 ABCB10P4-201ENST00000566803 2184 ntBASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 MIR219A2-201ENST00000608502 1504 ntBASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 AC007375.3-201ENST00000600936 2314 ntBASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GFI1BQ5VTD9 AC096887.2-201ENST00000623443 1957 ntBASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 AC148477.6-201ENST00000623746 465 ntBASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GFI1BQ5VTD9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 CR559946.2-201ENST00000623684 991 ntBASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GFI1BQ5VTD9 HLA-V-202ENST00000446817 847 ntBASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFI1BQ5VTD9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms