Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YAP1801YHR161C 1914 nt5.22□□□□□ -1.57
RRP40Q08285 TAX4YJL083W 1815 nt5.22□□□□□ -1.57
RRP40Q08285 YDL034WYDL034W 345 nt5.21□□□□□ -1.58
RRP40Q08285 CAD1YDR423C 1230 nt5.21□□□□□ -1.58
RRP40Q08285 YGR176WYGR176W 348 nt5.21□□□□□ -1.58
RRP40Q08285 DAL82YNL314W 768 nt5.21□□□□□ -1.58
RRP40Q08285 SSK1YLR006C 2139 nt5.21□□□□□ -1.58
RRP40Q08285 ELP3YPL086C 1674 nt5.21□□□□□ -1.58
RRP40Q08285 MAL11YGR289C 1851 nt5.2□□□□□ -1.58
RRP40Q08285 TEF1YPR080W 1377 nt5.2□□□□□ -1.58
RRP40Q08285 TEF2YBR118W 1377 nt5.2□□□□□ -1.58
RRP40Q08285 HSF1YGL073W 2502 nt5.2□□□□□ -1.58
RRP40Q08285 GIR2YDR152W 798 nt5.2□□□□□ -1.58
RRP40Q08285 MPM1YJL066C 759 nt5.2□□□□□ -1.58
RRP40Q08285 RMA1YKL132C 1293 nt5.2□□□□□ -1.58
RRP40Q08285 ARG1YOL058W 1263 nt5.2□□□□□ -1.58
RRP40Q08285 VTC2YFL004W 2487 nt5.19□□□□□ -1.58
RRP40Q08285 GUF1YLR289W 1938 nt5.19□□□□□ -1.58
RRP40Q08285 RTT106YNL206C 1368 nt5.19□□□□□ -1.58
RRP40Q08285 JIP4YDR475C 2631 nt5.19□□□□□ -1.58
RRP40Q08285 PGU1YJR153W 1086 nt5.19□□□□□ -1.58
RRP40Q08285 YLL059CYLL059C 507 nt5.19□□□□□ -1.58
RRP40Q08285 YNR048WYNR048W 1182 nt5.19□□□□□ -1.58
RRP40Q08285 snR32snR32 188 nt5.19□□□□□ -1.58
RRP40Q08285 BAP2YBR068C 1830 nt5.18□□□□□ -1.58
RRP40Q08285 UTP7YER082C 1665 nt5.18□□□□□ -1.58
RRP40Q08285 EIS1YMR031C 2532 nt5.18□□□□□ -1.58
RRP40Q08285 RPT1YKL145W 1404 nt5.18□□□□□ -1.58
RRP40Q08285 RHO3YIL118W 696 nt5.18□□□□□ -1.58
RRP40Q08285 SYN8YAL014C 768 nt5.18□□□□□ -1.58
RRP40Q08285 COS9YKL219W 1224 nt5.18□□□□□ -1.58
RRP40Q08285 BUD14YAR014C 2130 nt5.17□□□□□ -1.58
RRP40Q08285 ACF2YLR144C 2340 nt5.17□□□□□ -1.58
RRP40Q08285 YJR115WYJR115W 510 nt5.17□□□□□ -1.58
RRP40Q08285 YLR194CYLR194C 765 nt5.17□□□□□ -1.58
RRP40Q08285 PFA3YNL326C 1011 nt5.17□□□□□ -1.58
RRP40Q08285 YOL097W-AYOL097W-A 186 nt5.17□□□□□ -1.58
RRP40Q08285 ENT2YLR206W 1842 nt5.16□□□□□ -1.58
RRP40Q08285 VCX1YDL128W 1236 nt5.16□□□□□ -1.58
RRP40Q08285 PHO86YJL117W 936 nt5.16□□□□□ -1.58
RRP40Q08285 HST2YPL015C 1074 nt5.16□□□□□ -1.58
RRP40Q08285 RET1YOR207C 3450 nt5.16□□□□□ -1.58
RRP40Q08285 MNN2YBR015C 1794 nt5.16□□□□□ -1.58
RRP40Q08285 PIF1YML061C 2580 nt5.15□□□□□ -1.58
RRP40Q08285 VAM7YGL212W 951 nt5.15□□□□□ -1.59
RRP40Q08285 COG1YGL223C 1254 nt5.15□□□□□ -1.59
RRP40Q08285 YJL193WYJL193W 1209 nt5.15□□□□□ -1.59
RRP40Q08285 APN1YKL114C 1104 nt5.15□□□□□ -1.59
RRP40Q08285 ERI1YPL096C-A 207 nt5.15□□□□□ -1.59
RRP40Q08285 UBC4YBR082C 447 nt5.15□□□□□ -1.59
RRP40Q08285 GEP3YOR205C 1671 nt5.15□□□□□ -1.59
RRP40Q08285 UBA1YKL210W 3075 nt5.15□□□□□ -1.59
RRP40Q08285 NUD1YOR373W 2556 nt5.14□□□□□ -1.59
RRP40Q08285 CCZ1YBR131W 2115 nt5.14□□□□□ -1.59
RRP40Q08285 SFC1YJR095W 969 nt5.14□□□□□ -1.59
RRP40Q08285 NRM1YNR009W 750 nt5.14□□□□□ -1.59
RRP40Q08285 YPR195CYPR195C 330 nt5.14□□□□□ -1.59
RRP40Q08285 RGT1YKL038W 3513 nt5.14□□□□□ -1.59
RRP40Q08285 MTQ2YDR140W 666 nt5.13□□□□□ -1.59
RRP40Q08285 YGL072CYGL072C 360 nt5.13□□□□□ -1.59
RRP40Q08285 COX17YLL009C 210 nt5.13□□□□□ -1.59
RRP40Q08285 TFB4YPR056W 1017 nt5.13□□□□□ -1.59
RRP40Q08285 KDX1YKL161C 1302 nt5.13□□□□□ -1.59
RRP40Q08285 ASH1YKL185W 1767 nt5.13□□□□□ -1.59
RRP40Q08285 RFA1YAR007C 1866 nt5.13□□□□□ -1.59
RRP40Q08285 ACS2YLR153C 2052 nt5.12□□□□□ -1.59
RRP40Q08285 DED81YHR019C 1665 nt5.12□□□□□ -1.59
RRP40Q08285 ARP2YDL029W 1176 nt5.12□□□□□ -1.59
RRP40Q08285 SIP2YGL208W 1248 nt5.12□□□□□ -1.59
RRP40Q08285 MTQ1YNL063W 945 nt5.12□□□□□ -1.59
RRP40Q08285 CAM1YPL048W 1248 nt5.12□□□□□ -1.59
RRP40Q08285 OPT1YJL212C 2400 nt5.12□□□□□ -1.59
RRP40Q08285 YHR045WYHR045W 1683 nt5.12□□□□□ -1.59
RRP40Q08285 PWP1YLR196W 1731 nt5.11□□□□□ -1.59
RRP40Q08285 UTP18YJL069C 1785 nt5.11□□□□□ -1.59
RRP40Q08285 YDR541CYDR541C 1035 nt5.11□□□□□ -1.59
RRP40Q08285 PSH1YOL054W 1221 nt5.11□□□□□ -1.59
RRP40Q08285 ENV9YOR246C 993 nt5.11□□□□□ -1.59
RRP40Q08285 CBC2YPL178W 627 nt5.11□□□□□ -1.59
RRP40Q08285 RRT2YBR246W 1164 nt5.11□□□□□ -1.59
RRP40Q08285 SEC12YNR026C 1416 nt5.11□□□□□ -1.59
RRP40Q08285 TOS4YLR183C 1470 nt5.11□□□□□ -1.59
RRP40Q08285 ASF2YDL197C 1578 nt5.1□□□□□ -1.59
RRP40Q08285 PHM8YER037W 966 nt5.1□□□□□ -1.59
RRP40Q08285 YIL060WYIL060W 435 nt5.1□□□□□ -1.59
RRP40Q08285 SNT2YGL131C 4212 nt5.1□□□□□ -1.59
RRP40Q08285 ACC1YNR016C 6702 nt5.1□□□□□ -1.59
RRP40Q08285 VTH1YIL173W 4650 nt5.09□□□□□ -1.59
RRP40Q08285 VTH2YJL222W 4650 nt5.09□□□□□ -1.59
RRP40Q08285 YDL023CYDL023C 321 nt5.09□□□□□ -1.59
RRP40Q08285 MRPL13YKR006C 795 nt5.09□□□□□ -1.59
RRP40Q08285 YLR118CYLR118C 684 nt5.09□□□□□ -1.59
RRP40Q08285 RHO2YNL090W 579 nt5.09□□□□□ -1.59
RRP40Q08285 PDR16YNL231C 1056 nt5.09□□□□□ -1.59
RRP40Q08285 MCX1YBR227C 1563 nt5.08□□□□□ -1.6
RRP40Q08285 TIM54YJL054W 1437 nt5.08□□□□□ -1.6
RRP40Q08285 YFL034WYFL034W 3222 nt5.08□□□□□ -1.6
RRP40Q08285 MLC1YGL106W 450 nt5.08□□□□□ -1.6
RRP40Q08285 YIR020W-AYIR020W-A 243 nt5.08□□□□□ -1.6
RRP40Q08285 UBX2YML013W 1755 nt5.08□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 96.7 ms