Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 DUS4YLR405W 1104 nt6.33□□□□□ -1.4
TY4A-JP47023 PCL1YNL289W 840 nt6.33□□□□□ -1.4
TY4A-JP47023 YDR514CYDR514C 1452 nt6.33□□□□□ -1.4
TY4A-JP47023 AFT1YGL071W 2073 nt6.32□□□□□ -1.4
TY4A-JP47023 ERV14YGL054C 417 nt6.32□□□□□ -1.4
TY4A-JP47023 SAY1YGR263C 1275 nt6.32□□□□□ -1.4
TY4A-JP47023 CAB4YGR277C 918 nt6.32□□□□□ -1.4
TY4A-JP47023 YHL045WYHL045W 348 nt6.32□□□□□ -1.4
TY4A-JP47023 YRB2YIL063C 984 nt6.32□□□□□ -1.4
TY4A-JP47023 YAL016C-BYAL016C-B 186 nt6.32□□□□□ -1.4
TY4A-JP47023 HSP150YJL159W 1242 nt6.32□□□□□ -1.4
TY4A-JP47023 ECM1YAL059W 639 nt6.32□□□□□ -1.4
TY4A-JP47023 NCE103YNL036W 666 nt6.32□□□□□ -1.4
TY4A-JP47023 UBS1YBR165W 834 nt6.32□□□□□ -1.4
TY4A-JP47023 ERC1YHR032W 1746 nt6.32□□□□□ -1.4
TY4A-JP47023 CCT8YJL008C 1707 nt6.32□□□□□ -1.4
TY4A-JP47023 FAA4YMR246W 2085 nt6.32□□□□□ -1.4
TY4A-JP47023 RGD1YBR260C 2001 nt6.32□□□□□ -1.4
TY4A-JP47023 STT3YGL022W 2157 nt6.31□□□□□ -1.4
TY4A-JP47023 YDL121CYDL121C 450 nt6.31□□□□□ -1.4
TY4A-JP47023 TDH2YJR009C 999 nt6.31□□□□□ -1.4
TY4A-JP47023 UBC12YLR306W 567 nt6.31□□□□□ -1.4
TY4A-JP47023 MRPL4YLR439W 960 nt6.31□□□□□ -1.4
TY4A-JP47023 YML6YML025C 861 nt6.31□□□□□ -1.4
TY4A-JP47023 CAR1YPL111W 1002 nt6.31□□□□□ -1.4
TY4A-JP47023 SMF3YLR034C 1422 nt6.31□□□□□ -1.4
TY4A-JP47023 CSC1YLR241W 2349 nt6.31□□□□□ -1.4
TY4A-JP47023 YHK8YHR048W 1545 nt6.3□□□□□ -1.4
TY4A-JP47023 ICS3YJL077C 396 nt6.3□□□□□ -1.4
TY4A-JP47023 BUD14YAR014C 2130 nt6.3□□□□□ -1.4
TY4A-JP47023 SSP2YOR242C 1116 nt6.3□□□□□ -1.4
TY4A-JP47023 HXT7YDR342C 1713 nt6.3□□□□□ -1.4
TY4A-JP47023 HXT6YDR343C 1713 nt6.3□□□□□ -1.4
TY4A-JP47023 SLD2YKL108W 1362 nt6.3□□□□□ -1.4
TY4A-JP47023 YDR387CYDR387C 1668 nt6.3□□□□□ -1.4
TY4A-JP47023 SIS2YKR072C 1689 nt6.3□□□□□ -1.4
TY4A-JP47023 VMA3YEL027W 483 nt6.29□□□□□ -1.4
TY4A-JP47023 YHR213W-BYHR213W-B 300 nt6.29□□□□□ -1.4
TY4A-JP47023 YAR064WYAR064W 300 nt6.29□□□□□ -1.4
TY4A-JP47023 CPA1YOR303W 1236 nt6.29□□□□□ -1.4
TY4A-JP47023 ISA2YPR067W 558 nt6.29□□□□□ -1.4
TY4A-JP47023 COX10YPL172C 1389 nt6.29□□□□□ -1.4
TY4A-JP47023 BZZ1YHR114W 1902 nt6.29□□□□□ -1.4
TY4A-JP47023 HEM1YDR232W 1647 nt6.28□□□□□ -1.4
TY4A-JP47023 UIP5YKR044W 1332 nt6.28□□□□□ -1.4
TY4A-JP47023 YPT1YFL038C 621 nt6.28□□□□□ -1.4
TY4A-JP47023 DUO1YGL061C 744 nt6.28□□□□□ -1.4
TY4A-JP47023 YGR011WYGR011W 327 nt6.28□□□□□ -1.4
TY4A-JP47023 YHR193C-AYHR193C-A 375 nt6.28□□□□□ -1.4
TY4A-JP47023 VAM3YOR106W 852 nt6.28□□□□□ -1.4
TY4A-JP47023 CKS1YBR135W 453 nt6.28□□□□□ -1.4
TY4A-JP47023 COX9YDL067C 180 nt6.27□□□□□ -1.41
TY4A-JP47023 TRP4YDR354W 1143 nt6.27□□□□□ -1.41
TY4A-JP47023 PFA5YDR459C 1125 nt6.27□□□□□ -1.41
TY4A-JP47023 YHR022CYHR022C 771 nt6.27□□□□□ -1.41
TY4A-JP47023 SPC34YKR037C 888 nt6.27□□□□□ -1.41
TY4A-JP47023 YLL059CYLL059C 507 nt6.27□□□□□ -1.41
TY4A-JP47023 BLS1YLR408C 369 nt6.27□□□□□ -1.41
TY4A-JP47023 MAC1YMR021C 1254 nt6.27□□□□□ -1.41
TY4A-JP47023 SPS18YNL204C 903 nt6.27□□□□□ -1.41
TY4A-JP47023 VPS28YPL065W 729 nt6.27□□□□□ -1.41
TY4A-JP47023 MCM4YPR019W 2802 nt6.27□□□□□ -1.41
TY4A-JP47023 ARE2YNR019W 1929 nt6.27□□□□□ -1.41
TY4A-JP47023 CSR1YLR380W 1227 nt6.26□□□□□ -1.41
TY4A-JP47023 YBL029WYBL029W 1131 nt6.26□□□□□ -1.41
TY4A-JP47023 MRPS8YMR158W 468 nt6.26□□□□□ -1.41
TY4A-JP47023 TOM40YMR203W 1164 nt6.26□□□□□ -1.41
TY4A-JP47023 JNM1YMR294W 1122 nt6.26□□□□□ -1.41
TY4A-JP47023 YGR054WYGR054W 1929 nt6.26□□□□□ -1.41
TY4A-JP47023 SNF3YDL194W 2655 nt6.26□□□□□ -1.41
TY4A-JP47023 PPM2YOL141W 2088 nt6.26□□□□□ -1.41
TY4A-JP47023 UBP7YIL156W 3216 nt6.25□□□□□ -1.41
TY4A-JP47023 UTR2YEL040W 1404 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)BtG(GCC)B 71 nt6.25□□□□□ -1.41
TY4A-JP47023 SUF16tG(GCC)C 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)D1tG(GCC)D1 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)D2tG(GCC)D2 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)EtG(GCC)E 71 nt6.25□□□□□ -1.41
TY4A-JP47023 SUF20tG(GCC)F1 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)F2tG(GCC)F2 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)G1tG(GCC)G1 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)G2tG(GCC)G2 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)J1tG(GCC)J1 71 nt6.25□□□□□ -1.41
TY4A-JP47023 SUF23tG(GCC)J2 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)MtG(GCC)M 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)O1tG(GCC)O1 71 nt6.25□□□□□ -1.41
TY4A-JP47023 SUF17tG(GCC)O2 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)P1tG(GCC)P1 71 nt6.25□□□□□ -1.41
TY4A-JP47023 tG(GCC)P2tG(GCC)P2 71 nt6.25□□□□□ -1.41
TY4A-JP47023 MPS2YGL075C 1164 nt6.25□□□□□ -1.41
TY4A-JP47023 YLF2YHL014C 1218 nt6.25□□□□□ -1.41
TY4A-JP47023 YHL018WYHL018W 363 nt6.25□□□□□ -1.41
TY4A-JP47023 YNG2YHR090C 849 nt6.25□□□□□ -1.41
TY4A-JP47023 MPC2YHR162W 390 nt6.25□□□□□ -1.41
TY4A-JP47023 YMR295CYMR295C 594 nt6.25□□□□□ -1.41
TY4A-JP47023 YPL257WYPL257W 582 nt6.25□□□□□ -1.41
TY4A-JP47023 PEX34YCL056C 435 nt6.25□□□□□ -1.41
TY4A-JP47023 IPI3YNL182C 1668 nt6.25□□□□□ -1.41
TY4A-JP47023 MRE11YMR224C 2079 nt6.25□□□□□ -1.41
TY4A-JP47023 VPS36YLR417W 1701 nt6.25□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms