Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 MAL11YGR289C 1851 nt6.17□□□□□ -1.42
MSH1P25846 ICL1YER065C 1674 nt6.17□□□□□ -1.42
MSH1P25846 ROG3YFR022W 2202 nt6.17□□□□□ -1.42
MSH1P25846 YEL068CYEL068C 333 nt6.17□□□□□ -1.42
MSH1P25846 TSR3YOR006C 942 nt6.17□□□□□ -1.42
MSH1P25846 LPL1YOR059C 1353 nt6.17□□□□□ -1.42
MSH1P25846 YME1YPR024W 2244 nt6.17□□□□□ -1.42
MSH1P25846 YPR196WYPR196W 1413 nt6.16□□□□□ -1.42
MSH1P25846 MKC7YDR144C 1791 nt6.16□□□□□ -1.42
MSH1P25846 SSK1YLR006C 2139 nt6.16□□□□□ -1.42
MSH1P25846 SEC20YDR498C 1152 nt6.16□□□□□ -1.42
MSH1P25846 HVG1YER039C 750 nt6.16□□□□□ -1.42
MSH1P25846 PML1YLR016C 615 nt6.16□□□□□ -1.42
MSH1P25846 CPA1YOR303W 1236 nt6.16□□□□□ -1.42
MSH1P25846 YPR098CYPR098C 486 nt6.16□□□□□ -1.42
MSH1P25846 WTM1YOR230W 1314 nt6.16□□□□□ -1.42
MSH1P25846 SRV2YNL138W 1581 nt6.15□□□□□ -1.42
MSH1P25846 UGX2YDL169C 672 nt6.15□□□□□ -1.42
MSH1P25846 PIC2YER053C 903 nt6.15□□□□□ -1.42
MSH1P25846 VPS24YKL041W 675 nt6.15□□□□□ -1.42
MSH1P25846 STM1YLR150W 822 nt6.15□□□□□ -1.42
MSH1P25846 YNL097W-AYNL097W-A 156 nt6.15□□□□□ -1.42
MSH1P25846 CRF1YDR223W 1404 nt6.15□□□□□ -1.43
MSH1P25846 RVB2YPL235W 1416 nt6.15□□□□□ -1.43
MSH1P25846 URA7YBL039C 1740 nt6.14□□□□□ -1.43
MSH1P25846 DJP1YIR004W 1299 nt6.14□□□□□ -1.43
MSH1P25846 DUG1YFR044C 1446 nt6.14□□□□□ -1.43
MSH1P25846 DSF1YEL070W 1509 nt6.14□□□□□ -1.43
MSH1P25846 YNR073CYNR073C 1509 nt6.14□□□□□ -1.43
MSH1P25846 ASF2YDL197C 1578 nt6.14□□□□□ -1.43
MSH1P25846 SIA1YOR137C 1869 nt6.13□□□□□ -1.43
MSH1P25846 HEM3YDL205C 984 nt6.13□□□□□ -1.43
MSH1P25846 KSS1YGR040W 1107 nt6.13□□□□□ -1.43
MSH1P25846 YOL035CYOL035C 303 nt6.13□□□□□ -1.43
MSH1P25846 RPT2YDL007W 1314 nt6.13□□□□□ -1.43
MSH1P25846 AVO1YOL078W 3531 nt6.13□□□□□ -1.43
MSH1P25846 GEX1YCL073C 1848 nt6.13□□□□□ -1.43
MSH1P25846 GEX2YKR106W 1848 nt6.13□□□□□ -1.43
MSH1P25846 YGL118CYGL118C 438 nt6.12□□□□□ -1.43
MSH1P25846 UTP9YHR196W 1728 nt6.12□□□□□ -1.43
MSH1P25846 HAP3YBL021C 435 nt6.12□□□□□ -1.43
MSH1P25846 CRZ1YNL027W 2037 nt6.12□□□□□ -1.43
MSH1P25846 ABZ1YNR033W 2364 nt6.12□□□□□ -1.43
MSH1P25846 RPN7YPR108W 1290 nt6.12□□□□□ -1.43
MSH1P25846 CLD1YGR110W 1338 nt6.11□□□□□ -1.43
MSH1P25846 MMS2YGL087C 414 nt6.11□□□□□ -1.43
MSH1P25846 LDS1YAL018C 978 nt6.11□□□□□ -1.43
MSH1P25846 YMR135W-AYMR135W-A 534 nt6.11□□□□□ -1.43
MSH1P25846 GPT2YKR067W 2232 nt6.1□□□□□ -1.43
MSH1P25846 SVF1YDR346C 1446 nt6.1□□□□□ -1.43
MSH1P25846 YLH47YPR125W 1365 nt6.1□□□□□ -1.43
MSH1P25846 AAD6YFL056C 639 nt6.1□□□□□ -1.43
MSH1P25846 APN1YKL114C 1104 nt6.1□□□□□ -1.43
MSH1P25846 QRI5YLR204W 336 nt6.1□□□□□ -1.43
MSH1P25846 SNN1YNL086W 309 nt6.1□□□□□ -1.43
MSH1P25846 MRPS16YPL013C 366 nt6.1□□□□□ -1.43
MSH1P25846 YDL218WYDL218W 954 nt6.09□□□□□ -1.43
MSH1P25846 COX20YDR231C 618 nt6.09□□□□□ -1.43
MSH1P25846 HOR7YMR251W-A 180 nt6.09□□□□□ -1.43
MSH1P25846 NPT1YOR209C 1290 nt6.09□□□□□ -1.43
MSH1P25846 SET5YHR207C 1581 nt6.09□□□□□ -1.43
MSH1P25846 RRN3YKL125W 1884 nt6.09□□□□□ -1.44
MSH1P25846 TKL1YPR074C 2043 nt6.08□□□□□ -1.44
MSH1P25846 PRE3YJL001W 648 nt6.08□□□□□ -1.44
MSH1P25846 YBL081WYBL081W 1107 nt6.08□□□□□ -1.44
MSH1P25846 YNR068CYNR068C 819 nt6.08□□□□□ -1.44
MSH1P25846 PEX32YBR168W 1242 nt6.08□□□□□ -1.44
MSH1P25846 UBX2YML013W 1755 nt6.08□□□□□ -1.44
MSH1P25846 RKM4YDR257C 1485 nt6.08□□□□□ -1.44
MSH1P25846 YDR034W-BYDR034W-B 156 nt6.07□□□□□ -1.44
MSH1P25846 HST4YDR191W 1113 nt6.07□□□□□ -1.44
MSH1P25846 YHR095WYHR095W 495 nt6.07□□□□□ -1.44
MSH1P25846 YJL107CYJL107C 1164 nt6.07□□□□□ -1.44
MSH1P25846 RPC19YNL113W 429 nt6.07□□□□□ -1.44
MSH1P25846 AIM41YOR215C 558 nt6.07□□□□□ -1.44
MSH1P25846 NRD1YNL251C 1728 nt6.07□□□□□ -1.44
MSH1P25846 QRI1YDL103C 1434 nt6.07□□□□□ -1.44
MSH1P25846 YDR109CYDR109C 2148 nt6.07□□□□□ -1.44
MSH1P25846 SLD2YKL108W 1362 nt6.06□□□□□ -1.44
MSH1P25846 YML082WYML082W 1950 nt6.06□□□□□ -1.44
MSH1P25846 UGO1YDR470C 1509 nt6.06□□□□□ -1.44
MSH1P25846 IMG2YCR071C 441 nt6.06□□□□□ -1.44
MSH1P25846 YDR015CYDR015C 240 nt6.06□□□□□ -1.44
MSH1P25846 YHR213W-AYHR213W-A 234 nt6.06□□□□□ -1.44
MSH1P25846 PRS1YKL181W 1284 nt6.06□□□□□ -1.44
MSH1P25846 OSW5YMR148W 447 nt6.06□□□□□ -1.44
MSH1P25846 VNX1YNL321W 2727 nt6.05□□□□□ -1.44
MSH1P25846 PCL10YGL134W 1302 nt6.05□□□□□ -1.44
MSH1P25846 MDH3YDL078C 1032 nt6.05□□□□□ -1.44
MSH1P25846 YKR075CYKR075C 924 nt6.05□□□□□ -1.44
MSH1P25846 ZRT2YLR130C 1269 nt6.05□□□□□ -1.44
MSH1P25846 YML012C-AYML012C-A 378 nt6.05□□□□□ -1.44
MSH1P25846 APE3YBR286W 1614 nt6.05□□□□□ -1.44
MSH1P25846 ATG32YIL146C 1590 nt6.05□□□□□ -1.44
MSH1P25846 RGT1YKL038W 3513 nt6.04□□□□□ -1.44
MSH1P25846 SUB2YDL084W 1341 nt6.04□□□□□ -1.44
MSH1P25846 RAD24YER173W 1980 nt6.04□□□□□ -1.44
MSH1P25846 UBA1YKL210W 3075 nt6.04□□□□□ -1.44
MSH1P25846 MAK31YCR020C-A 267 nt6.04□□□□□ -1.44
MSH1P25846 LYS12YIL094C 1116 nt6.04□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms