Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 AC027682.1-201ENST00000562846 899 ntBASIC19.42■□□□□ 0.7
NF1P21359 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.42■□□□□ 0.7
NF1P21359 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NF1P21359 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NF1P21359 AP002414.2-202ENST00000590929 1450 ntBASIC19.42■□□□□ 0.7
NF1P21359 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
NF1P21359 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.42■□□□□ 0.7
NF1P21359 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NF1P21359 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NF1P21359 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NF1P21359 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NF1P21359 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NF1P21359 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NF1P21359 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NF1P21359 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.41■□□□□ 0.7
NF1P21359 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NF1P21359 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NF1P21359 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NF1P21359 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.39■□□□□ 0.7
NF1P21359 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
NF1P21359 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.39■□□□□ 0.7
NF1P21359 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.39■□□□□ 0.69
NF1P21359 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NF1P21359 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.39■□□□□ 0.69
NF1P21359 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.39■□□□□ 0.69
NF1P21359 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.39■□□□□ 0.69
NF1P21359 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NF1P21359 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.39■□□□□ 0.69
NF1P21359 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NF1P21359 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NF1P21359 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.38■□□□□ 0.69
NF1P21359 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.38■□□□□ 0.69
NF1P21359 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.38■□□□□ 0.69
NF1P21359 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.38■□□□□ 0.69
NF1P21359 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 TMEM191A-211ENST00000637163 1067 ntBASIC19.38■□□□□ 0.69
NF1P21359 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
NF1P21359 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.38■□□□□ 0.69
NF1P21359 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NF1P21359 MIR4767-201ENST00000582827 78 ntBASIC19.37■□□□□ 0.69
NF1P21359 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NF1P21359 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NF1P21359 AC011551.1-201ENST00000614101 683 ntBASIC19.37■□□□□ 0.69
NF1P21359 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NF1P21359 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.36■□□□□ 0.69
NF1P21359 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.36■□□□□ 0.69
NF1P21359 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NF1P21359 AC093827.2-201ENST00000512654 315 ntBASIC19.36■□□□□ 0.69
NF1P21359 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NF1P21359 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NF1P21359 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NF1P21359 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NF1P21359 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.35■□□□□ 0.69
NF1P21359 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NF1P21359 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NF1P21359 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.35■□□□□ 0.69
NF1P21359 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.35■□□□□ 0.69
NF1P21359 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.35■□□□□ 0.69
NF1P21359 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NF1P21359 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.35■□□□□ 0.69
NF1P21359 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NF1P21359 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.35■□□□□ 0.69
NF1P21359 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NF1P21359 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NF1P21359 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NF1P21359 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.34■□□□□ 0.69
NF1P21359 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.34■□□□□ 0.69
NF1P21359 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NF1P21359 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NF1P21359 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NF1P21359 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
NF1P21359 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.33■□□□□ 0.69
NF1P21359 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.33■□□□□ 0.69
NF1P21359 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NF1P21359 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NF1P21359 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NF1P21359 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NF1P21359 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NF1P21359 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.32■□□□□ 0.68
NF1P21359 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NF1P21359 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NF1P21359 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NF1P21359 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
NF1P21359 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NF1P21359 YBX1P1-201ENST00000445822 960 ntBASIC19.32■□□□□ 0.68
NF1P21359 DUX4L2-201ENST00000561772 1275 ntBASIC19.32■□□□□ 0.68
NF1P21359 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.32■□□□□ 0.68
NF1P21359 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.32■□□□□ 0.68
NF1P21359 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
NF1P21359 DUX4L6-201ENST00000626483 1275 ntBASIC19.32■□□□□ 0.68
NF1P21359 DUX4L1-201ENST00000627662 1275 ntBASIC19.32■□□□□ 0.68
NF1P21359 DUX4L8-201ENST00000629013 1275 ntBASIC19.32■□□□□ 0.68
NF1P21359 DUX4L3-201ENST00000630187 1275 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms