Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gm3880A0A1B0GSB3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 AL845457.1-201ENSMUST00000197244 68 ntBASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Gm3880A0A1B0GSB3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Gm3880A0A1B0GSB3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm3880A0A1B0GSB3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm3880A0A1B0GSB3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Golph3-202ENSMUST00000226517 2359 ntBASIC10.57□□□□□ -0.72
Gm3880A0A1B0GSB3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Gm3880A0A1B0GSB3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms