Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 FUN26YAL022C 1554 nt19.61■□□□□ 0.73
TY1B-DR3Q99231 INM2YDR287W 879 nt19.6■□□□□ 0.73
TY1B-DR3Q99231 IMP2'YIL154C 1041 nt19.6■□□□□ 0.73
TY1B-DR3Q99231 TRM9YML014W 840 nt19.6■□□□□ 0.73
TY1B-DR3Q99231 YEL076C-AYEL076C-A 651 nt19.51■□□□□ 0.71
TY1B-DR3Q99231 YEL076CYEL076C 651 nt19.51■□□□□ 0.71
TY1B-DR3Q99231 YLR464WYLR464W 651 nt19.51■□□□□ 0.71
TY1B-DR3Q99231 ERV46YAL042W 1248 nt19.5■□□□□ 0.71
TY1B-DR3Q99231 YJL152WYJL152W 360 nt19.48■□□□□ 0.71
TY1B-DR3Q99231 CCT6YDR188W 1641 nt19.48■□□□□ 0.71
TY1B-DR3Q99231 ADO1YJR105W 1023 nt19.4■□□□□ 0.7
TY1B-DR3Q99231 MXR2YCL033C 507 nt19.34■□□□□ 0.69
TY1B-DR3Q99231 SIS1YNL007C 1059 nt19.28■□□□□ 0.68
TY1B-DR3Q99231 IDH1YNL037C 1083 nt19.24■□□□□ 0.67
TY1B-DR3Q99231 TIR4YOR009W 1464 nt19.2■□□□□ 0.66
TY1B-DR3Q99231 ALF1YNL148C 765 nt19.2■□□□□ 0.66
TY1B-DR3Q99231 YDR433WYDR433W 441 nt19.17■□□□□ 0.66
TY1B-DR3Q99231 SUF2tP(AGG)C 72 nt19.17■□□□□ 0.66
TY1B-DR3Q99231 SUF10tP(AGG)N 72 nt19.17■□□□□ 0.66
TY1B-DR3Q99231 YDR095CYDR095C 411 nt19.12■□□□□ 0.65
TY1B-DR3Q99231 YDR094WYDR094W 336 nt19.07■□□□□ 0.64
TY1B-DR3Q99231 YPS1YLR120C 1710 nt19.07■□□□□ 0.64
TY1B-DR3Q99231 GBP2YCL011C 1284 nt19.06■□□□□ 0.64
TY1B-DR3Q99231 YKR040CYKR040C 504 nt19■□□□□ 0.63
TY1B-DR3Q99231 YFL015W-AYFL015W-A 318 nt18.98■□□□□ 0.63
TY1B-DR3Q99231 PTH1YHR189W 573 nt18.92■□□□□ 0.62
TY1B-DR3Q99231 HUA1YGR268C 597 nt18.79■□□□□ 0.6
TY1B-DR3Q99231 YHR165W-AYHR165W-A 312 nt18.77■□□□□ 0.6
TY1B-DR3Q99231 YCL048W-AYCL048W-A 240 nt18.77■□□□□ 0.6
TY1B-DR3Q99231 ART5YGR068C 1761 nt18.71■□□□□ 0.59
TY1B-DR3Q99231 GFD2YCL036W 1701 nt18.69■□□□□ 0.58
TY1B-DR3Q99231 FRD1YEL047C 1413 nt18.69■□□□□ 0.58
TY1B-DR3Q99231 YMR057CYMR057C 372 nt18.68■□□□□ 0.58
TY1B-DR3Q99231 TCD2YKL027W 1344 nt18.67■□□□□ 0.58
TY1B-DR3Q99231 CAC2YML102W 1407 nt18.66■□□□□ 0.58
TY1B-DR3Q99231 DED1YOR204W 1815 nt18.61■□□□□ 0.57
TY1B-DR3Q99231 SBA1YKL117W 651 nt18.6■□□□□ 0.57
TY1B-DR3Q99231 PTP1YDL230W 1008 nt18.58■□□□□ 0.57
TY1B-DR3Q99231 RTS2YOR077W 699 nt18.58■□□□□ 0.56
TY1B-DR3Q99231 PAU16YKL224C 372 nt18.57■□□□□ 0.56
TY1B-DR3Q99231 RPP2AYOL039W 321 nt18.57■□□□□ 0.56
TY1B-DR3Q99231 RRD1YIL153W 1182 nt18.49■□□□□ 0.55
TY1B-DR3Q99231 PRE6YOL038W 765 nt18.49■□□□□ 0.55
TY1B-DR3Q99231 SOR2YDL246C 1074 nt18.48■□□□□ 0.55
TY1B-DR3Q99231 SOR1YJR159W 1074 nt18.48■□□□□ 0.55
TY1B-DR3Q99231 LCB1YMR296C 1677 nt18.39■□□□□ 0.54
TY1B-DR3Q99231 FMT1YBL013W 1206 nt18.39■□□□□ 0.53
TY1B-DR3Q99231 PET9YBL030C 957 nt18.38■□□□□ 0.53
TY1B-DR3Q99231 YLR235CYLR235C 399 nt18.35■□□□□ 0.53
TY1B-DR3Q99231 YCL042WYCL042W 360 nt18.33■□□□□ 0.53
TY1B-DR3Q99231 YKL030WYKL030W 606 nt18.32■□□□□ 0.52
TY1B-DR3Q99231 FPS1YLL043W 2010 nt18.31■□□□□ 0.52
TY1B-DR3Q99231 DCW1YKL046C 1350 nt18.3■□□□□ 0.52
TY1B-DR3Q99231 YFR018CYFR018C 1092 nt18.22■□□□□ 0.51
TY1B-DR3Q99231 MEP2YNL142W 1500 nt18.21■□□□□ 0.51
TY1B-DR3Q99231 TIM23YNR017W 669 nt18.12■□□□□ 0.49
TY1B-DR3Q99231 IRC15YPL017C 1500 nt18.06■□□□□ 0.48
TY1B-DR3Q99231 tL(GAG)GtL(GAG)G 82 nt18.06■□□□□ 0.48
TY1B-DR3Q99231 CUE1YMR264W 612 nt18.04■□□□□ 0.48
TY1B-DR3Q99231 CWP1YKL096W 720 nt18.04■□□□□ 0.48
TY1B-DR3Q99231 DIC1YLR348C 897 nt17.99■□□□□ 0.47
TY1B-DR3Q99231 ADH2YMR303C 1047 nt17.97■□□□□ 0.47
TY1B-DR3Q99231 YLR179CYLR179C 606 nt17.94■□□□□ 0.46
TY1B-DR3Q99231 EMI2YDR516C 1503 nt17.91■□□□□ 0.46
TY1B-DR3Q99231 FMP52YER004W 696 nt17.89■□□□□ 0.45
TY1B-DR3Q99231 RRT5YFR032C 870 nt17.89■□□□□ 0.45
TY1B-DR3Q99231 SNF6YHL025W 999 nt17.89■□□□□ 0.45
TY1B-DR3Q99231 SPT5YML010W 3192 nt17.84■□□□□ 0.45
TY1B-DR3Q99231 YFL066CYFL066C 1179 nt17.79■□□□□ 0.44
TY1B-DR3Q99231 WSC2YNL283C 1512 nt17.78■□□□□ 0.44
TY1B-DR3Q99231 YPR064WYPR064W 420 nt17.74■□□□□ 0.43
TY1B-DR3Q99231 YDL221WYDL221W 552 nt17.73■□□□□ 0.43
TY1B-DR3Q99231 PEX25YPL112C 1185 nt17.73■□□□□ 0.43
TY1B-DR3Q99231 GIS3YLR094C 1509 nt17.69■□□□□ 0.42
TY1B-DR3Q99231 YIL100WYIL100W 354 nt17.68■□□□□ 0.42
TY1B-DR3Q99231 TAD3YLR316C 969 nt17.62■□□□□ 0.41
TY1B-DR3Q99231 YIH1YCR059C 777 nt17.6■□□□□ 0.41
TY1B-DR3Q99231 PCM1YEL058W 1674 nt17.54■□□□□ 0.4
TY1B-DR3Q99231 NAT4YMR069W 858 nt17.48■□□□□ 0.39
TY1B-DR3Q99231 YNL115CYNL115C 1935 nt17.48■□□□□ 0.39
TY1B-DR3Q99231 AHT1YHR093W 549 nt17.46■□□□□ 0.39
TY1B-DR3Q99231 YSP3YOR003W 1437 nt17.46■□□□□ 0.39
TY1B-DR3Q99231 YLL053CYLL053C 459 nt17.44■□□□□ 0.38
TY1B-DR3Q99231 YSC84YHR016C 1407 nt17.44■□□□□ 0.38
TY1B-DR3Q99231 MIR1YJR077C 936 nt17.43■□□□□ 0.38
TY1B-DR3Q99231 GLK1YCL040W 1503 nt17.43■□□□□ 0.38
TY1B-DR3Q99231 SDH1YKL148C 1923 nt17.42■□□□□ 0.38
TY1B-DR3Q99231 SCC4YER147C 1875 nt17.4■□□□□ 0.38
TY1B-DR3Q99231 RNQ1YCL028W 1218 nt17.4■□□□□ 0.38
TY1B-DR3Q99231 MSF1YPR047W 1410 nt17.39■□□□□ 0.37
TY1B-DR3Q99231 BDH1YAL060W 1149 nt17.38■□□□□ 0.37
TY1B-DR3Q99231 BIO4YNR057C 714 nt17.38■□□□□ 0.37
TY1B-DR3Q99231 FTR1YER145C 1215 nt17.37■□□□□ 0.37
TY1B-DR3Q99231 YLR415CYLR415C 339 nt17.28■□□□□ 0.36
TY1B-DR3Q99231 YMR090WYMR090W 684 nt17.27■□□□□ 0.35
TY1B-DR3Q99231 YMR244WYMR244W 1068 nt17.25■□□□□ 0.35
TY1B-DR3Q99231 TRM5YHR070W 1500 nt17.25■□□□□ 0.35
TY1B-DR3Q99231 GAL1YBR020W 1587 nt17.22■□□□□ 0.35
TY1B-DR3Q99231 RRT12YCR045C 1476 nt17.21■□□□□ 0.34
TY1B-DR3Q99231 ATF2YGR177C 1608 nt17.2■□□□□ 0.34
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms