Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 ALF1YNL148C 765 nt16.47■□□□□ 0.23
RCM1P53972 SUF2tP(AGG)C 72 nt16.46■□□□□ 0.23
RCM1P53972 SUF10tP(AGG)N 72 nt16.46■□□□□ 0.23
RCM1P53972 YJL152WYJL152W 360 nt16.41■□□□□ 0.22
RCM1P53972 LPX1YOR084W 1164 nt16.41■□□□□ 0.22
RCM1P53972 YPS1YLR120C 1710 nt16.4■□□□□ 0.22
RCM1P53972 YDR095CYDR095C 411 nt16.37■□□□□ 0.21
RCM1P53972 MRPL8YJL063C 717 nt16.37■□□□□ 0.21
RCM1P53972 SPP1YPL138C 1062 nt16.35■□□□□ 0.21
RCM1P53972 ERV46YAL042W 1248 nt16.31■□□□□ 0.2
RCM1P53972 SIS1YNL007C 1059 nt16.27■□□□□ 0.2
RCM1P53972 IDH1YNL037C 1083 nt16.25■□□□□ 0.19
RCM1P53972 TIR4YOR009W 1464 nt16.23■□□□□ 0.19
RCM1P53972 YDR433WYDR433W 441 nt16.2■□□□□ 0.18
RCM1P53972 YEL076C-AYEL076C-A 651 nt16.16■□□□□ 0.18
RCM1P53972 YEL076CYEL076C 651 nt16.16■□□□□ 0.18
RCM1P53972 YHR165W-AYHR165W-A 312 nt16.16■□□□□ 0.18
RCM1P53972 YLR464WYLR464W 651 nt16.16■□□□□ 0.18
RCM1P53972 RTG1YOL067C 534 nt16.16■□□□□ 0.18
RCM1P53972 ADO1YJR105W 1023 nt16.12■□□□□ 0.17
RCM1P53972 YKR040CYKR040C 504 nt16.11■□□□□ 0.17
RCM1P53972 MXR2YCL033C 507 nt16.1■□□□□ 0.17
RCM1P53972 GBP2YCL011C 1284 nt16.09■□□□□ 0.17
RCM1P53972 UBX6YJL048C 1191 nt16.07■□□□□ 0.16
RCM1P53972 RPP2AYOL039W 321 nt16.05■□□□□ 0.16
RCM1P53972 ART5YGR068C 1761 nt16.03■□□□□ 0.16
RCM1P53972 PTP1YDL230W 1008 nt16.01■□□□□ 0.15
RCM1P53972 CAC2YML102W 1407 nt15.97■□□□□ 0.15
RCM1P53972 YMR057CYMR057C 372 nt15.97■□□□□ 0.15
RCM1P53972 PET9YBL030C 957 nt15.9■□□□□ 0.14
RCM1P53972 GFD2YCL036W 1701 nt15.9■□□□□ 0.14
RCM1P53972 MEP2YNL142W 1500 nt15.89■□□□□ 0.13
RCM1P53972 SPT5YML010W 3192 nt15.89■□□□□ 0.13
RCM1P53972 YCL048W-AYCL048W-A 240 nt15.87■□□□□ 0.13
RCM1P53972 TCD2YKL027W 1344 nt15.81■□□□□ 0.12
RCM1P53972 DED1YOR204W 1815 nt15.78■□□□□ 0.12
RCM1P53972 HUA1YGR268C 597 nt15.75■□□□□ 0.11
RCM1P53972 FRD1YEL047C 1413 nt15.75■□□□□ 0.11
RCM1P53972 DCW1YKL046C 1350 nt15.74■□□□□ 0.11
RCM1P53972 RRD1YIL153W 1182 nt15.71■□□□□ 0.11
RCM1P53972 FPS1YLL043W 2010 nt15.7■□□□□ 0.1
RCM1P53972 RTS2YOR077W 699 nt15.68■□□□□ 0.1
RCM1P53972 YDR094WYDR094W 336 nt15.65■□□□□ 0.1
RCM1P53972 PTH1YHR189W 573 nt15.62■□□□□ 0.09
RCM1P53972 FMT1YBL013W 1206 nt15.6■□□□□ 0.09
RCM1P53972 YFL015W-AYFL015W-A 318 nt15.55■□□□□ 0.08
RCM1P53972 IRC15YPL017C 1500 nt15.54■□□□□ 0.08
RCM1P53972 SOR2YDL246C 1074 nt15.51■□□□□ 0.07
RCM1P53972 SOR1YJR159W 1074 nt15.51■□□□□ 0.07
RCM1P53972 YCL042WYCL042W 360 nt15.51■□□□□ 0.07
RCM1P53972 EMI2YDR516C 1503 nt15.5■□□□□ 0.07
RCM1P53972 YKL030WYKL030W 606 nt15.49■□□□□ 0.07
RCM1P53972 CUE1YMR264W 612 nt15.46■□□□□ 0.07
RCM1P53972 YLR235CYLR235C 399 nt15.45■□□□□ 0.06
RCM1P53972 YDL221WYDL221W 552 nt15.43■□□□□ 0.06
RCM1P53972 LCB1YMR296C 1677 nt15.43■□□□□ 0.06
RCM1P53972 GIS3YLR094C 1509 nt15.4■□□□□ 0.06
RCM1P53972 CWP1YKL096W 720 nt15.34■□□□□ 0.05
RCM1P53972 ADH2YMR303C 1047 nt15.31■□□□□ 0.04
RCM1P53972 FMP52YER004W 696 nt15.3■□□□□ 0.04
RCM1P53972 YMR090WYMR090W 684 nt15.23■□□□□ 0.03
RCM1P53972 YIL100WYIL100W 354 nt15.22■□□□□ 0.03
RCM1P53972 PAU16YKL224C 372 nt15.19■□□□□ 0.02
RCM1P53972 TIM23YNR017W 669 nt15.18■□□□□ 0.02
RCM1P53972 DIC1YLR348C 897 nt15.17■□□□□ 0.02
RCM1P53972 PRE6YOL038W 765 nt15.14■□□□□ 0.01
RCM1P53972 SCC4YER147C 1875 nt15.14■□□□□ 0.01
RCM1P53972 SDH1YKL148C 1923 nt15.13■□□□□ 0.01
RCM1P53972 YFR018CYFR018C 1092 nt15.13■□□□□ 0.01
RCM1P53972 tL(GAG)GtL(GAG)G 82 nt15.12■□□□□ 0.01
RCM1P53972 PCM1YEL058W 1674 nt15.12■□□□□ 0.01
RCM1P53972 SBA1YKL117W 651 nt15.11■□□□□ 0.01
RCM1P53972 YLR179CYLR179C 606 nt15.08■□□□□ 0
RCM1P53972 SNF6YHL025W 999 nt15.07■□□□□ 0
RCM1P53972 YBR220CYBR220C 1683 nt15.03■□□□□ -0
RCM1P53972 RRT5YFR032C 870 nt15□□□□□ -0.01
RCM1P53972 SSA4YER103W 1929 nt15□□□□□ -0.01
RCM1P53972 WSC2YNL283C 1512 nt14.99□□□□□ -0.01
RCM1P53972 RNQ1YCL028W 1218 nt14.99□□□□□ -0.01
RCM1P53972 YPR064WYPR064W 420 nt14.98□□□□□ -0.01
RCM1P53972 YIH1YCR059C 777 nt14.97□□□□□ -0.01
RCM1P53972 TAD3YLR316C 969 nt14.94□□□□□ -0.02
RCM1P53972 AHT1YHR093W 549 nt14.93□□□□□ -0.02
RCM1P53972 YFL066CYFL066C 1179 nt14.88□□□□□ -0.03
RCM1P53972 RRT12YCR045C 1476 nt14.83□□□□□ -0.03
RCM1P53972 YLL053CYLL053C 459 nt14.82□□□□□ -0.04
RCM1P53972 YNL195CYNL195C 786 nt14.8□□□□□ -0.04
RCM1P53972 BIO4YNR057C 714 nt14.79□□□□□ -0.04
RCM1P53972 PEX25YPL112C 1185 nt14.77□□□□□ -0.05
RCM1P53972 BDH1YAL060W 1149 nt14.75□□□□□ -0.05
RCM1P53972 YSC84YHR016C 1407 nt14.75□□□□□ -0.05
RCM1P53972 FTR1YER145C 1215 nt14.74□□□□□ -0.05
RCM1P53972 YSP3YOR003W 1437 nt14.73□□□□□ -0.05
RCM1P53972 GAL1YBR020W 1587 nt14.73□□□□□ -0.05
RCM1P53972 YHL050CYHL050C 2094 nt14.69□□□□□ -0.06
RCM1P53972 SIM1YIL123W 1431 nt14.69□□□□□ -0.06
RCM1P53972 YNL115CYNL115C 1935 nt14.68□□□□□ -0.06
RCM1P53972 AQY1YPR192W 918 nt14.68□□□□□ -0.06
RCM1P53972 TRM5YHR070W 1500 nt14.66□□□□□ -0.06
RCM1P53972 NAT4YMR069W 858 nt14.62□□□□□ -0.07
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms