Protein–RNA interactions for Protein: P52593

NUP188, Nucleoporin NUP188, yeastyeast

Known RBP Predictions only

Length 1,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP188P52593 CCT6YDR188W 1641 nt17.59■□□□□ 0.41
NUP188P52593 MRPL8YJL063C 717 nt17.56■□□□□ 0.4
NUP188P52593 YJL152WYJL152W 360 nt17.52■□□□□ 0.39
NUP188P52593 SPP1YPL138C 1062 nt17.51■□□□□ 0.39
NUP188P52593 UBX6YJL048C 1191 nt17.47■□□□□ 0.39
NUP188P52593 ERV46YAL042W 1248 nt17.42■□□□□ 0.38
NUP188P52593 ALF1YNL148C 765 nt17.42■□□□□ 0.38
NUP188P52593 RTG1YOL067C 534 nt17.41■□□□□ 0.38
NUP188P52593 SUF2tP(AGG)C 72 nt17.38■□□□□ 0.37
NUP188P52593 SUF10tP(AGG)N 72 nt17.38■□□□□ 0.37
NUP188P52593 YEL076C-AYEL076C-A 651 nt17.36■□□□□ 0.37
NUP188P52593 YEL076CYEL076C 651 nt17.36■□□□□ 0.37
NUP188P52593 YLR464WYLR464W 651 nt17.36■□□□□ 0.37
NUP188P52593 ADO1YJR105W 1023 nt17.33■□□□□ 0.37
NUP188P52593 IDH1YNL037C 1083 nt17.32■□□□□ 0.36
NUP188P52593 YDR095CYDR095C 411 nt17.29■□□□□ 0.36
NUP188P52593 TIR4YOR009W 1464 nt17.26■□□□□ 0.35
NUP188P52593 MXR2YCL033C 507 nt17.25■□□□□ 0.35
NUP188P52593 SIS1YNL007C 1059 nt17.23■□□□□ 0.35
NUP188P52593 YDR433WYDR433W 441 nt17.23■□□□□ 0.35
NUP188P52593 YPS1YLR120C 1710 nt17.22■□□□□ 0.35
NUP188P52593 GBP2YCL011C 1284 nt17.12■□□□□ 0.33
NUP188P52593 YHR165W-AYHR165W-A 312 nt17.04■□□□□ 0.32
NUP188P52593 YKR040CYKR040C 504 nt17.03■□□□□ 0.32
NUP188P52593 YDR094WYDR094W 336 nt16.97■□□□□ 0.31
NUP188P52593 YCL048W-AYCL048W-A 240 nt16.94■□□□□ 0.3
NUP188P52593 YFL015W-AYFL015W-A 318 nt16.89■□□□□ 0.29
NUP188P52593 ART5YGR068C 1761 nt16.87■□□□□ 0.29
NUP188P52593 PTH1YHR189W 573 nt16.85■□□□□ 0.29
NUP188P52593 GFD2YCL036W 1701 nt16.84■□□□□ 0.29
NUP188P52593 RPP2AYOL039W 321 nt16.84■□□□□ 0.29
NUP188P52593 YMR057CYMR057C 372 nt16.82■□□□□ 0.28
NUP188P52593 CAC2YML102W 1407 nt16.82■□□□□ 0.28
NUP188P52593 HUA1YGR268C 597 nt16.81■□□□□ 0.28
NUP188P52593 TCD2YKL027W 1344 nt16.8■□□□□ 0.28
NUP188P52593 PTP1YDL230W 1008 nt16.77■□□□□ 0.28
NUP188P52593 RTS2YOR077W 699 nt16.74■□□□□ 0.27
NUP188P52593 FRD1YEL047C 1413 nt16.72■□□□□ 0.27
NUP188P52593 DED1YOR204W 1815 nt16.66■□□□□ 0.26
NUP188P52593 PET9YBL030C 957 nt16.65■□□□□ 0.26
NUP188P52593 RRD1YIL153W 1182 nt16.59■□□□□ 0.25
NUP188P52593 SOR2YDL246C 1074 nt16.57■□□□□ 0.24
NUP188P52593 SOR1YJR159W 1074 nt16.57■□□□□ 0.24
NUP188P52593 MEP2YNL142W 1500 nt16.57■□□□□ 0.24
NUP188P52593 SBA1YKL117W 651 nt16.55■□□□□ 0.24
NUP188P52593 DCW1YKL046C 1350 nt16.53■□□□□ 0.24
NUP188P52593 YCL042WYCL042W 360 nt16.51■□□□□ 0.23
NUP188P52593 FPS1YLL043W 2010 nt16.49■□□□□ 0.23
NUP188P52593 YLR235CYLR235C 399 nt16.47■□□□□ 0.23
NUP188P52593 FMT1YBL013W 1206 nt16.46■□□□□ 0.23
NUP188P52593 PAU16YKL224C 372 nt16.45■□□□□ 0.22
NUP188P52593 LCB1YMR296C 1677 nt16.44■□□□□ 0.22
NUP188P52593 YKL030WYKL030W 606 nt16.43■□□□□ 0.22
NUP188P52593 PRE6YOL038W 765 nt16.35■□□□□ 0.21
NUP188P52593 CUE1YMR264W 612 nt16.31■□□□□ 0.2
NUP188P52593 IRC15YPL017C 1500 nt16.31■□□□□ 0.2
NUP188P52593 EMI2YDR516C 1503 nt16.25■□□□□ 0.19
NUP188P52593 CWP1YKL096W 720 nt16.24■□□□□ 0.19
NUP188P52593 TIM23YNR017W 669 nt16.23■□□□□ 0.19
NUP188P52593 SPT5YML010W 3192 nt16.21■□□□□ 0.19
NUP188P52593 YFR018CYFR018C 1092 nt16.21■□□□□ 0.18
NUP188P52593 tL(GAG)GtL(GAG)G 82 nt16.18■□□□□ 0.18
NUP188P52593 FMP52YER004W 696 nt16.17■□□□□ 0.18
NUP188P52593 DIC1YLR348C 897 nt16.17■□□□□ 0.18
NUP188P52593 ADH2YMR303C 1047 nt16.15■□□□□ 0.18
NUP188P52593 YDL221WYDL221W 552 nt16.13■□□□□ 0.17
NUP188P52593 YLR179CYLR179C 606 nt16.09■□□□□ 0.17
NUP188P52593 YIL100WYIL100W 354 nt16.06■□□□□ 0.16
NUP188P52593 GIS3YLR094C 1509 nt16.03■□□□□ 0.16
NUP188P52593 RRT5YFR032C 870 nt16.01■□□□□ 0.15
NUP188P52593 SNF6YHL025W 999 nt15.94■□□□□ 0.14
NUP188P52593 YPR064WYPR064W 420 nt15.94■□□□□ 0.14
NUP188P52593 WSC2YNL283C 1512 nt15.9■□□□□ 0.14
NUP188P52593 PEX25YPL112C 1185 nt15.85■□□□□ 0.13
NUP188P52593 PCM1YEL058W 1674 nt15.84■□□□□ 0.13
NUP188P52593 YIH1YCR059C 777 nt15.83■□□□□ 0.12
NUP188P52593 YMR090WYMR090W 684 nt15.83■□□□□ 0.12
NUP188P52593 YFL066CYFL066C 1179 nt15.82■□□□□ 0.12
NUP188P52593 TAD3YLR316C 969 nt15.82■□□□□ 0.12
NUP188P52593 SDH1YKL148C 1923 nt15.81■□□□□ 0.12
NUP188P52593 SCC4YER147C 1875 nt15.81■□□□□ 0.12
NUP188P52593 RNQ1YCL028W 1218 nt15.72■□□□□ 0.11
NUP188P52593 AHT1YHR093W 549 nt15.7■□□□□ 0.1
NUP188P52593 YLL053CYLL053C 459 nt15.68■□□□□ 0.1
NUP188P52593 YSC84YHR016C 1407 nt15.67■□□□□ 0.1
NUP188P52593 NAT4YMR069W 858 nt15.65■□□□□ 0.1
NUP188P52593 BIO4YNR057C 714 nt15.65■□□□□ 0.1
NUP188P52593 YNL115CYNL115C 1935 nt15.63■□□□□ 0.09
NUP188P52593 FTR1YER145C 1215 nt15.62■□□□□ 0.09
NUP188P52593 YBR220CYBR220C 1683 nt15.62■□□□□ 0.09
NUP188P52593 YSP3YOR003W 1437 nt15.61■□□□□ 0.09
NUP188P52593 GLK1YCL040W 1503 nt15.59■□□□□ 0.09
NUP188P52593 BDH1YAL060W 1149 nt15.57■□□□□ 0.08
NUP188P52593 YNL195CYNL195C 786 nt15.56■□□□□ 0.08
NUP188P52593 SSA4YER103W 1929 nt15.54■□□□□ 0.08
NUP188P52593 MIR1YJR077C 936 nt15.54■□□□□ 0.08
NUP188P52593 YLR415CYLR415C 339 nt15.53■□□□□ 0.08
NUP188P52593 RRT12YCR045C 1476 nt15.52■□□□□ 0.08
NUP188P52593 AQY1YPR192W 918 nt15.52■□□□□ 0.08
NUP188P52593 TRM5YHR070W 1500 nt15.52■□□□□ 0.07
Retrieved 100 of 7,029 protein–RNA pairs in 35.1 ms