Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 DAL1YIR027C 1383 nt19.17■□□□□ 0.66
TY1B-JR2P47100 YEL076C-AYEL076C-A 651 nt19.15■□□□□ 0.66
TY1B-JR2P47100 YEL076CYEL076C 651 nt19.15■□□□□ 0.66
TY1B-JR2P47100 YLR464WYLR464W 651 nt19.15■□□□□ 0.66
TY1B-JR2P47100 TRM9YML014W 840 nt19.15■□□□□ 0.66
TY1B-JR2P47100 FUN26YAL022C 1554 nt19.13■□□□□ 0.65
TY1B-JR2P47100 INM2YDR287W 879 nt19.11■□□□□ 0.65
TY1B-JR2P47100 ADO1YJR105W 1023 nt19.07■□□□□ 0.64
TY1B-JR2P47100 ERV46YAL042W 1248 nt19.07■□□□□ 0.64
TY1B-JR2P47100 YJL152WYJL152W 360 nt19.04■□□□□ 0.64
TY1B-JR2P47100 CCT6YDR188W 1641 nt18.99■□□□□ 0.63
TY1B-JR2P47100 MXR2YCL033C 507 nt18.9■□□□□ 0.62
TY1B-JR2P47100 SIS1YNL007C 1059 nt18.83■□□□□ 0.61
TY1B-JR2P47100 IDH1YNL037C 1083 nt18.82■□□□□ 0.6
TY1B-JR2P47100 YDR433WYDR433W 441 nt18.76■□□□□ 0.59
TY1B-JR2P47100 YDR094WYDR094W 336 nt18.73■□□□□ 0.59
TY1B-JR2P47100 ALF1YNL148C 765 nt18.73■□□□□ 0.59
TY1B-JR2P47100 SUF2tP(AGG)C 72 nt18.72■□□□□ 0.59
TY1B-JR2P47100 SUF10tP(AGG)N 72 nt18.72■□□□□ 0.59
TY1B-JR2P47100 TIR4YOR009W 1464 nt18.71■□□□□ 0.59
TY1B-JR2P47100 YFL015W-AYFL015W-A 318 nt18.65■□□□□ 0.58
TY1B-JR2P47100 GBP2YCL011C 1284 nt18.64■□□□□ 0.57
TY1B-JR2P47100 YPS1YLR120C 1710 nt18.6■□□□□ 0.57
TY1B-JR2P47100 YDR095CYDR095C 411 nt18.6■□□□□ 0.57
TY1B-JR2P47100 YKR040CYKR040C 504 nt18.6■□□□□ 0.57
TY1B-JR2P47100 PTH1YHR189W 573 nt18.5■□□□□ 0.55
TY1B-JR2P47100 HUA1YGR268C 597 nt18.45■□□□□ 0.54
TY1B-JR2P47100 YCL048W-AYCL048W-A 240 nt18.32■□□□□ 0.52
TY1B-JR2P47100 SBA1YKL117W 651 nt18.28■□□□□ 0.52
TY1B-JR2P47100 YHR165W-AYHR165W-A 312 nt18.26■□□□□ 0.51
TY1B-JR2P47100 FRD1YEL047C 1413 nt18.25■□□□□ 0.51
TY1B-JR2P47100 TCD2YKL027W 1344 nt18.24■□□□□ 0.51
TY1B-JR2P47100 ART5YGR068C 1761 nt18.23■□□□□ 0.51
TY1B-JR2P47100 CAC2YML102W 1407 nt18.21■□□□□ 0.51
TY1B-JR2P47100 PAU16YKL224C 372 nt18.21■□□□□ 0.51
TY1B-JR2P47100 YMR057CYMR057C 372 nt18.21■□□□□ 0.51
TY1B-JR2P47100 GFD2YCL036W 1701 nt18.19■□□□□ 0.5
TY1B-JR2P47100 DED1YOR204W 1815 nt18.15■□□□□ 0.5
TY1B-JR2P47100 PRE6YOL038W 765 nt18.1■□□□□ 0.49
TY1B-JR2P47100 RPP2AYOL039W 321 nt18.08■□□□□ 0.48
TY1B-JR2P47100 PTP1YDL230W 1008 nt18.07■□□□□ 0.48
TY1B-JR2P47100 RTS2YOR077W 699 nt18.07■□□□□ 0.48
TY1B-JR2P47100 SOR2YDL246C 1074 nt18.03■□□□□ 0.48
TY1B-JR2P47100 SOR1YJR159W 1074 nt18.03■□□□□ 0.48
TY1B-JR2P47100 RRD1YIL153W 1182 nt18.02■□□□□ 0.48
TY1B-JR2P47100 LCB1YMR296C 1677 nt17.99■□□□□ 0.47
TY1B-JR2P47100 YLR235CYLR235C 399 nt17.96■□□□□ 0.47
TY1B-JR2P47100 YKL030WYKL030W 606 nt17.94■□□□□ 0.46
TY1B-JR2P47100 YCL042WYCL042W 360 nt17.93■□□□□ 0.46
TY1B-JR2P47100 FMT1YBL013W 1206 nt17.92■□□□□ 0.46
TY1B-JR2P47100 PET9YBL030C 957 nt17.91■□□□□ 0.46
TY1B-JR2P47100 YFR018CYFR018C 1092 nt17.86■□□□□ 0.45
TY1B-JR2P47100 FPS1YLL043W 2010 nt17.83■□□□□ 0.44
TY1B-JR2P47100 DCW1YKL046C 1350 nt17.75■□□□□ 0.43
TY1B-JR2P47100 TIM23YNR017W 669 nt17.71■□□□□ 0.43
TY1B-JR2P47100 MEP2YNL142W 1500 nt17.68■□□□□ 0.42
TY1B-JR2P47100 tL(GAG)GtL(GAG)G 82 nt17.68■□□□□ 0.42
TY1B-JR2P47100 CWP1YKL096W 720 nt17.61■□□□□ 0.41
TY1B-JR2P47100 RRT5YFR032C 870 nt17.58■□□□□ 0.4
TY1B-JR2P47100 DIC1YLR348C 897 nt17.56■□□□□ 0.4
TY1B-JR2P47100 SNF6YHL025W 999 nt17.56■□□□□ 0.4
TY1B-JR2P47100 CUE1YMR264W 612 nt17.56■□□□□ 0.4
TY1B-JR2P47100 IRC15YPL017C 1500 nt17.54■□□□□ 0.4
TY1B-JR2P47100 YLR179CYLR179C 606 nt17.54■□□□□ 0.4
TY1B-JR2P47100 ADH2YMR303C 1047 nt17.52■□□□□ 0.4
TY1B-JR2P47100 FMP52YER004W 696 nt17.45■□□□□ 0.38
TY1B-JR2P47100 YFL066CYFL066C 1179 nt17.4■□□□□ 0.38
TY1B-JR2P47100 EMI2YDR516C 1503 nt17.39■□□□□ 0.37
TY1B-JR2P47100 YPR064WYPR064W 420 nt17.37■□□□□ 0.37
TY1B-JR2P47100 WSC2YNL283C 1512 nt17.35■□□□□ 0.37
TY1B-JR2P47100 PEX25YPL112C 1185 nt17.35■□□□□ 0.37
TY1B-JR2P47100 SPT5YML010W 3192 nt17.26■□□□□ 0.35
TY1B-JR2P47100 TAD3YLR316C 969 nt17.23■□□□□ 0.35
TY1B-JR2P47100 YDL221WYDL221W 552 nt17.22■□□□□ 0.35
TY1B-JR2P47100 YIL100WYIL100W 354 nt17.22■□□□□ 0.35
TY1B-JR2P47100 GIS3YLR094C 1509 nt17.19■□□□□ 0.34
TY1B-JR2P47100 NAT4YMR069W 858 nt17.16■□□□□ 0.34
TY1B-JR2P47100 YIH1YCR059C 777 nt17.15■□□□□ 0.34
TY1B-JR2P47100 GLK1YCL040W 1503 nt17.1■□□□□ 0.33
TY1B-JR2P47100 PCM1YEL058W 1674 nt17.1■□□□□ 0.33
TY1B-JR2P47100 YNL115CYNL115C 1935 nt17.09■□□□□ 0.33
TY1B-JR2P47100 YSP3YOR003W 1437 nt17.06■□□□□ 0.32
TY1B-JR2P47100 AHT1YHR093W 549 nt17.06■□□□□ 0.32
TY1B-JR2P47100 MSF1YPR047W 1410 nt17.06■□□□□ 0.32
TY1B-JR2P47100 MIR1YJR077C 936 nt17.05■□□□□ 0.32
TY1B-JR2P47100 YSC84YHR016C 1407 nt17.03■□□□□ 0.32
TY1B-JR2P47100 YLL053CYLL053C 459 nt17■□□□□ 0.31
TY1B-JR2P47100 BDH1YAL060W 1149 nt16.98■□□□□ 0.31
TY1B-JR2P47100 RNQ1YCL028W 1218 nt16.97■□□□□ 0.31
TY1B-JR2P47100 YMR244WYMR244W 1068 nt16.95■□□□□ 0.3
TY1B-JR2P47100 FTR1YER145C 1215 nt16.94■□□□□ 0.3
TY1B-JR2P47100 BIO4YNR057C 714 nt16.92■□□□□ 0.3
TY1B-JR2P47100 SDH1YKL148C 1923 nt16.91■□□□□ 0.3
TY1B-JR2P47100 YLR415CYLR415C 339 nt16.9■□□□□ 0.3
TY1B-JR2P47100 SCC4YER147C 1875 nt16.9■□□□□ 0.3
TY1B-JR2P47100 THI74YDR438W 1113 nt16.83■□□□□ 0.28
TY1B-JR2P47100 TRM5YHR070W 1500 nt16.82■□□□□ 0.28
TY1B-JR2P47100 GLR1YPL091W 1452 nt16.8■□□□□ 0.28
TY1B-JR2P47100 GAL1YBR020W 1587 nt16.79■□□□□ 0.28
TY1B-JR2P47100 YMR090WYMR090W 684 nt16.79■□□□□ 0.28
Retrieved 100 of 7,029 protein–RNA pairs in 64.3 ms