Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 TRM9YML014W 840 nt15.81■□□□□ 0.12
RPN11P43588 POA1YBR022W 534 nt15.78■□□□□ 0.12
RPN11P43588 ERV46YAL042W 1248 nt15.76■□□□□ 0.11
RPN11P43588 YFL015W-AYFL015W-A 318 nt15.75■□□□□ 0.11
RPN11P43588 NAB2YGL122C 1578 nt15.73■□□□□ 0.11
RPN11P43588 FUN26YAL022C 1554 nt15.7■□□□□ 0.1
RPN11P43588 YDR094WYDR094W 336 nt15.69■□□□□ 0.1
RPN11P43588 DAL1YIR027C 1383 nt15.69■□□□□ 0.1
RPN11P43588 FPR4YLR449W 1179 nt15.68■□□□□ 0.1
RPN11P43588 BUD23YCR047C 828 nt15.65■□□□□ 0.1
RPN11P43588 FIS1YIL065C 468 nt15.62■□□□□ 0.09
RPN11P43588 CCT6YDR188W 1641 nt15.61■□□□□ 0.09
RPN11P43588 HUA1YGR268C 597 nt15.56■□□□□ 0.08
RPN11P43588 PHO4YFR034C 939 nt15.55■□□□□ 0.08
RPN11P43588 YKR040CYKR040C 504 nt15.54■□□□□ 0.08
RPN11P43588 YDR433WYDR433W 441 nt15.53■□□□□ 0.08
RPN11P43588 YJL152WYJL152W 360 nt15.53■□□□□ 0.08
RPN11P43588 IDH1YNL037C 1083 nt15.52■□□□□ 0.08
RPN11P43588 SBA1YKL117W 651 nt15.39■□□□□ 0.05
RPN11P43588 SUF2tP(AGG)C 72 nt15.38■□□□□ 0.05
RPN11P43588 SUF10tP(AGG)N 72 nt15.38■□□□□ 0.05
RPN11P43588 MXR2YCL033C 507 nt15.36■□□□□ 0.05
RPN11P43588 GBP2YCL011C 1284 nt15.3■□□□□ 0.04
RPN11P43588 ALF1YNL148C 765 nt15.27■□□□□ 0.04
RPN11P43588 YPS1YLR120C 1710 nt15.16■□□□□ 0.02
RPN11P43588 TIR4YOR009W 1464 nt15.12■□□□□ 0.01
RPN11P43588 PAU16YKL224C 372 nt15.06■□□□□ 0
RPN11P43588 FRD1YEL047C 1413 nt15□□□□□ -0.01
RPN11P43588 PTH1YHR189W 573 nt14.99□□□□□ -0.01
RPN11P43588 YKL030WYKL030W 606 nt14.99□□□□□ -0.01
RPN11P43588 TCD2YKL027W 1344 nt14.98□□□□□ -0.01
RPN11P43588 YDR095CYDR095C 411 nt14.98□□□□□ -0.01
RPN11P43588 CAC2YML102W 1407 nt14.96□□□□□ -0.01
RPN11P43588 YLR235CYLR235C 399 nt14.91□□□□□ -0.02
RPN11P43588 YCL048W-AYCL048W-A 240 nt14.87□□□□□ -0.03
RPN11P43588 YFR018CYFR018C 1092 nt14.86□□□□□ -0.03
RPN11P43588 DED1YOR204W 1815 nt14.86□□□□□ -0.03
RPN11P43588 LCB1YMR296C 1677 nt14.85□□□□□ -0.03
RPN11P43588 YMR057CYMR057C 372 nt14.85□□□□□ -0.03
RPN11P43588 RRT5YFR032C 870 nt14.84□□□□□ -0.03
RPN11P43588 PRE6YOL038W 765 nt14.82□□□□□ -0.04
RPN11P43588 ART5YGR068C 1761 nt14.77□□□□□ -0.05
RPN11P43588 RRD1YIL153W 1182 nt14.74□□□□□ -0.05
RPN11P43588 PET9YBL030C 957 nt14.72□□□□□ -0.05
RPN11P43588 YCL042WYCL042W 360 nt14.72□□□□□ -0.05
RPN11P43588 YHR165W-AYHR165W-A 312 nt14.71□□□□□ -0.05
RPN11P43588 RPP2AYOL039W 321 nt14.71□□□□□ -0.05
RPN11P43588 SNF6YHL025W 999 nt14.67□□□□□ -0.06
RPN11P43588 SOR2YDL246C 1074 nt14.66□□□□□ -0.06
RPN11P43588 tL(GAG)GtL(GAG)G 82 nt14.66□□□□□ -0.06
RPN11P43588 SOR1YJR159W 1074 nt14.66□□□□□ -0.06
RPN11P43588 FMT1YBL013W 1206 nt14.65□□□□□ -0.06
RPN11P43588 GFD2YCL036W 1701 nt14.61□□□□□ -0.07
RPN11P43588 PTP1YDL230W 1008 nt14.6□□□□□ -0.07
RPN11P43588 DIC1YLR348C 897 nt14.52□□□□□ -0.09
RPN11P43588 FPS1YLL043W 2010 nt14.52□□□□□ -0.09
RPN11P43588 TIM23YNR017W 669 nt14.48□□□□□ -0.09
RPN11P43588 NAT4YMR069W 858 nt14.44□□□□□ -0.1
RPN11P43588 YFL066CYFL066C 1179 nt14.42□□□□□ -0.1
RPN11P43588 CWP1YKL096W 720 nt14.38□□□□□ -0.11
RPN11P43588 YMR244WYMR244W 1068 nt14.37□□□□□ -0.11
RPN11P43588 YPR064WYPR064W 420 nt14.37□□□□□ -0.11
RPN11P43588 YLR179CYLR179C 606 nt14.36□□□□□ -0.11
RPN11P43588 RTS2YOR077W 699 nt14.33□□□□□ -0.12
RPN11P43588 FMP52YER004W 696 nt14.32□□□□□ -0.12
RPN11P43588 TAD3YLR316C 969 nt14.32□□□□□ -0.12
RPN11P43588 ADH2YMR303C 1047 nt14.32□□□□□ -0.12
RPN11P43588 PEX25YPL112C 1185 nt14.29□□□□□ -0.12
RPN11P43588 GLK1YCL040W 1503 nt14.26□□□□□ -0.13
RPN11P43588 WSC2YNL283C 1512 nt14.25□□□□□ -0.13
RPN11P43588 MSF1YPR047W 1410 nt14.25□□□□□ -0.13
RPN11P43588 MEP2YNL142W 1500 nt14.23□□□□□ -0.13
RPN11P43588 AHT1YHR093W 549 nt14.21□□□□□ -0.13
RPN11P43588 CUE1YMR264W 612 nt14.17□□□□□ -0.14
RPN11P43588 YSP3YOR003W 1437 nt14.13□□□□□ -0.15
RPN11P43588 YNL115CYNL115C 1935 nt14.13□□□□□ -0.15
RPN11P43588 THI74YDR438W 1113 nt14.12□□□□□ -0.15
RPN11P43588 MIR1YJR077C 936 nt14.1□□□□□ -0.15
RPN11P43588 GLR1YPL091W 1452 nt14.1□□□□□ -0.15
RPN11P43588 IRC15YPL017C 1500 nt14.09□□□□□ -0.15
RPN11P43588 BDH1YAL060W 1149 nt14.07□□□□□ -0.16
RPN11P43588 RNQ1YCL028W 1218 nt14.07□□□□□ -0.16
RPN11P43588 DCW1YKL046C 1350 nt14.07□□□□□ -0.16
RPN11P43588 PCM1YEL058W 1674 nt14.04□□□□□ -0.16
RPN11P43588 RBG2YGR173W 1107 nt14.04□□□□□ -0.16
RPN11P43588 YIH1YCR059C 777 nt14.01□□□□□ -0.17
RPN11P43588 YIL100WYIL100W 354 nt13.96□□□□□ -0.17
RPN11P43588 YLR415CYLR415C 339 nt13.95□□□□□ -0.18
RPN11P43588 GIS3YLR094C 1509 nt13.95□□□□□ -0.18
RPN11P43588 SPT5YML010W 3192 nt13.91□□□□□ -0.18
RPN11P43588 DAT1YML113W 747 nt13.91□□□□□ -0.18
RPN11P43588 EMI2YDR516C 1503 nt13.9□□□□□ -0.18
RPN11P43588 YSC84YHR016C 1407 nt13.89□□□□□ -0.19
RPN11P43588 YDL221WYDL221W 552 nt13.88□□□□□ -0.19
RPN11P43588 VPS75YNL246W 795 nt13.87□□□□□ -0.19
RPN11P43588 AQY1YPR192W 918 nt13.86□□□□□ -0.19
RPN11P43588 YGL034CYGL034C 366 nt13.84□□□□□ -0.19
RPN11P43588 YLL053CYLL053C 459 nt13.82□□□□□ -0.2
RPN11P43588 FTR1YER145C 1215 nt13.78□□□□□ -0.2
RPN11P43588 NDI1YML120C 1542 nt13.78□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 32 ms