Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 AL662890.1-201ENST00000396818 632 ntBASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 AL645728.2-202ENST00000641679 227 ntBASIC23.56■■□□□ 1.36
CDC42BPBQ9Y5S2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 FNTAP2-201ENST00000430308 634 ntBASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 AL158070.2-201ENST00000623713 1621 ntBASIC23.55■■□□□ 1.36
CDC42BPBQ9Y5S2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 AC022211.2-201ENST00000585075 2527 ntBASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 NUS1P3-201ENST00000423502 862 ntBASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 HIST2H2BB-201ENST00000449108 381 ntBASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 AC013355.1-201ENST00000562625 723 ntBASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42BPBQ9Y5S2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 SPTLC1P5-201ENST00000450718 252 ntBASIC23.53■■□□□ 1.36
CDC42BPBQ9Y5S2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms