Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN3Q9UPQ7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 AC079776.1-201ENST00000401540 1152 ntBASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 BANF1P1-201ENST00000553684 263 ntBASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN3Q9UPQ7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 RN7SL618P-201ENST00000477850 296 ntBASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.58■□□□□ 0.89
PDZRN3Q9UPQ7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PDZRN3Q9UPQ7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 AC073439.1-201ENST00000624121 1774 ntBASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.57■□□□□ 0.88
PDZRN3Q9UPQ7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms