Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC006001.1-201ENST00000325130 474 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 AC104457.1-201ENST00000401024 814 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 FAM197Y7-201ENST00000432892 766 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 PFN1P12-201ENST00000455938 534 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 AC025181.2-201ENST00000606994 802 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 AP005019.2-201ENST00000615104 511 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 AL662844.4-201ENST00000606367 2838 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN11AQ9UI33 KRT8P14-201ENST00000414254 1442 ntBASIC20.12■□□□□ 0.81
SCN11AQ9UI33 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 BX539320.1-201ENST00000623759 877 ntBASIC20.11■□□□□ 0.81
SCN11AQ9UI33 AL139099.5-201ENST00000635274 300 ntBASIC20.11■□□□□ 0.81
SCN11AQ9UI33 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 PCDHA14-201ENST00000506751 2298 ntBASIC20.11■□□□□ 0.81
SCN11AQ9UI33 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 AL138799.1-201ENST00000448213 1675 ntBASIC20.11■□□□□ 0.81
SCN11AQ9UI33 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 POM121L8P-201ENST00000417732 1281 ntBASIC20.11■□□□□ 0.81
SCN11AQ9UI33 POM121L9P-203ENST00000441984 1285 ntBASIC20.11■□□□□ 0.81
SCN11AQ9UI33 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN11AQ9UI33 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 AC084364.1-201ENST00000551967 1556 ntBASIC20.1■□□□□ 0.81
SCN11AQ9UI33 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 GOLGA2P4-201ENST00000441462 777 ntBASIC20.1■□□□□ 0.81
SCN11AQ9UI33 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 PRSS30P-206ENST00000641773 873 ntBASIC20.1■□□□□ 0.81
SCN11AQ9UI33 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 AL603832.2-201ENST00000566195 2125 ntBASIC20.1■□□□□ 0.81
SCN11AQ9UI33 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN11AQ9UI33 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN11AQ9UI33 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCN11AQ9UI33 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.09■□□□□ 0.81
SCN11AQ9UI33 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms