Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC099336.1-201ENST00000417053 1171 ntBASIC17.74■□□□□ 0.43
VTA1Q9NP79 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 AC026410.3-201ENST00000514280 936 ntBASIC17.74■□□□□ 0.43
VTA1Q9NP79 AP000812.2-201ENST00000538934 718 ntBASIC17.74■□□□□ 0.43
VTA1Q9NP79 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AC011477.6-201ENST00000604980 1927 ntBASIC17.73■□□□□ 0.43
VTA1Q9NP79 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 FAM86MP-201ENST00000340703 885 ntBASIC17.73■□□□□ 0.43
VTA1Q9NP79 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AC093433.1-201ENST00000458048 571 ntBASIC17.73■□□□□ 0.43
VTA1Q9NP79 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AL583810.1-201ENST00000553344 1045 ntBASIC17.73■□□□□ 0.43
VTA1Q9NP79 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 AC080080.1-201ENST00000625121 2420 ntBASIC17.73■□□□□ 0.43
VTA1Q9NP79 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.73■□□□□ 0.43
VTA1Q9NP79 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTA1Q9NP79 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 AC134312.5-201ENST00000568031 1313 ntBASIC17.72■□□□□ 0.43
VTA1Q9NP79 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTA1Q9NP79 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 AL133267.1-201ENST00000398220 340 ntBASIC17.72■□□□□ 0.43
VTA1Q9NP79 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 CSF2RBP1-201ENST00000447905 391 ntBASIC17.72■□□□□ 0.43
VTA1Q9NP79 AC007551.1-201ENST00000457394 519 ntBASIC17.72■□□□□ 0.43
VTA1Q9NP79 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 RNA5SP412-201ENST00000516234 123 ntBASIC17.72■□□□□ 0.43
VTA1Q9NP79 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.72■□□□□ 0.43
VTA1Q9NP79 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms