Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC011477.6-201ENST00000604980 1927 ntBASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB3IPQ96QF0 REXO1L1P-202ENST00000608646 1974 ntBASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 U82695.1-201ENST00000635752 1889 ntBASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 SLC22A20-204ENST00000530038 1673 ntBASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB3IPQ96QF0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 AC133561.5-201ENST00000635547 218 ntBASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB3IPQ96QF0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 AC009090.5-201ENST00000624886 2285 ntBASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IPQ96QF0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms