Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 CROCCP4-201ENST00000457096 498 ntBASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 RRP7BP-205ENST00000566851 833 ntBASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 AC017083.2-201ENST00000608069 979 ntBASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 RPSAP52-203ENST00000622976 1023 ntBASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC85AQ96PX6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 MIR658-201ENST00000385210 100 ntBASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 PHKG1P2-201ENST00000457537 863 ntBASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AC008735.3-201ENST00000596646 500 ntBASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 AC010319.3-201ENST00000597028 470 ntBASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC85AQ96PX6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 HNRNPUP1-201ENST00000554987 333 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms