Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.31■■□□□ 1
CFAP53Q96M91 SPTLC1P1-201ENST00000447199 261 ntBASIC21.31■■□□□ 1
CFAP53Q96M91 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.31■■□□□ 1
CFAP53Q96M91 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.31■■□□□ 1
CFAP53Q96M91 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.31■■□□□ 1
CFAP53Q96M91 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.31■■□□□ 1
CFAP53Q96M91 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC21.31■■□□□ 1
CFAP53Q96M91 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CFAP53Q96M91 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CFAP53Q96M91 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.31■■□□□ 1
CFAP53Q96M91 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC21.31■■□□□ 1
CFAP53Q96M91 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CFAP53Q96M91 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CFAP53Q96M91 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.3■■□□□ 1
CFAP53Q96M91 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
CFAP53Q96M91 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.3■■□□□ 1
CFAP53Q96M91 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CFAP53Q96M91 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.3■■□□□ 1
CFAP53Q96M91 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.3■■□□□ 1
CFAP53Q96M91 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CFAP53Q96M91 SPDYE18-201ENST00000510091 1050 ntBASIC21.3■■□□□ 1
CFAP53Q96M91 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.3■■□□□ 1
CFAP53Q96M91 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.3■■□□□ 1
CFAP53Q96M91 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.3■■□□□ 1
CFAP53Q96M91 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.3■■□□□ 1
CFAP53Q96M91 AC097359.3-201ENST00000603982 1210 ntBASIC21.3■■□□□ 1
CFAP53Q96M91 AC004233.3-201ENST00000607794 1269 ntBASIC21.3■■□□□ 1
CFAP53Q96M91 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CFAP53Q96M91 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CFAP53Q96M91 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP53Q96M91 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.29■■□□□ 1
CFAP53Q96M91 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.29■■□□□ 1
CFAP53Q96M91 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 SUPT20HL2-201ENST00000486479 2409 ntBASIC21.29■■□□□ 1
CFAP53Q96M91 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.29■■□□□ 1
CFAP53Q96M91 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.29■■□□□ 1
CFAP53Q96M91 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.29■■□□□ 1
CFAP53Q96M91 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.29■■□□□ 1
CFAP53Q96M91 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.29■■□□□ 1
CFAP53Q96M91 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 DOC2GP-202ENST00000514950 1163 ntBASIC21.29■■□□□ 1
CFAP53Q96M91 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.29■■□□□ 1
CFAP53Q96M91 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 TIMM17BP1-201ENST00000545713 516 ntBASIC21.29■■□□□ 1
CFAP53Q96M91 AC092337.1-201ENST00000568699 1129 ntBASIC21.29■■□□□ 1
CFAP53Q96M91 SRD5A3P1-201ENST00000603021 949 ntBASIC21.29■■□□□ 1
CFAP53Q96M91 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.29■■□□□ 1
CFAP53Q96M91 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CFAP53Q96M91 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.29■■□□□ 1
CFAP53Q96M91 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.29■■□□□ 1
CFAP53Q96M91 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP53Q96M91 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.29■■□□□ 1
CFAP53Q96M91 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms