Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 TEX28P1-201ENST00000613479 1221 ntBASIC17.05■□□□□ 0.32
LMO3Q8TAP4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 TEX28P2-201ENST00000617764 1221 ntBASIC17.05■□□□□ 0.32
LMO3Q8TAP4 AC093028.1-201ENST00000622998 982 ntBASIC17.05■□□□□ 0.32
LMO3Q8TAP4 AL033527.5-202ENST00000641632 1098 ntBASIC17.05■□□□□ 0.32
LMO3Q8TAP4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 Z97205.2-201ENST00000564697 1639 ntBASIC17.04■□□□□ 0.32
LMO3Q8TAP4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 CNN2P2-201ENST00000443536 909 ntBASIC17.04■□□□□ 0.32
LMO3Q8TAP4 CNN2P3-201ENST00000450201 906 ntBASIC17.04■□□□□ 0.32
LMO3Q8TAP4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 AL512361.1-201ENST00000554200 418 ntBASIC17.04■□□□□ 0.32
LMO3Q8TAP4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 AC025678.2-201ENST00000562061 970 ntBASIC17.04■□□□□ 0.32
LMO3Q8TAP4 AL136317.3-201ENST00000618497 906 ntBASIC17.04■□□□□ 0.32
LMO3Q8TAP4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.04■□□□□ 0.32
LMO3Q8TAP4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LMO3Q8TAP4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AL109954.1-202ENST00000564051 2148 ntBASIC17.03■□□□□ 0.32
LMO3Q8TAP4 FO538757.1-201ENST00000623083 1397 ntBASIC17.03■□□□□ 0.32
LMO3Q8TAP4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC092580.3-201ENST00000430932 139 ntBASIC17.03■□□□□ 0.32
LMO3Q8TAP4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC004449.1-201ENST00000564240 433 ntBASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC025048.3-201ENST00000590609 569 ntBASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC005702.4-201ENST00000618393 416 ntBASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC006486.2-201ENST00000624246 2199 ntBASIC17.03■□□□□ 0.32
LMO3Q8TAP4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LMO3Q8TAP4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms