Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
DNAAF3Q8N9W5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF3Q8N9W5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 RNA5SP410-201ENST00000516285 106 ntBASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 PGAM5P1-201ENST00000518923 814 ntBASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 MTDHP5-201ENST00000598980 586 ntBASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 C20orf181-201ENST00000623918 480 ntBASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 AC011477.6-201ENST00000604980 1927 ntBASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF3Q8N9W5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DNAAF3Q8N9W5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 PCDHA3-202ENST00000532566 4594 ntBASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 AC004832.2-201ENST00000426397 482 ntBASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 ACTG1P14-201ENST00000446382 1122 ntBASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 TIMM8BP1-201ENST00000452384 211 ntBASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 AC243562.1-201ENST00000560672 389 ntBASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 GPALPP1-207ENST00000611650 899 ntBASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 FOXO1B-201ENST00000504678 1527 ntBASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNAAF3Q8N9W5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DNAAF3Q8N9W5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DNAAF3Q8N9W5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNAAF3Q8N9W5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms