Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AC092506.1-202ENST00000401022 528 ntBASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 BX284668.4-201ENST00000453917 508 ntBASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 RNA5SP486-201ENST00000515961 83 ntBASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AC023310.1-201ENST00000554836 735 ntBASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 RN7SL574P-201ENST00000581512 297 ntBASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AC018695.7-201ENST00000624587 2492 ntBASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 AL139094.1-201ENST00000405549 1188 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AC015967.2-201ENST00000624092 234 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AC006435.4-201ENST00000625037 234 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AL356737.1-201ENST00000634391 234 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AL158070.2-201ENST00000623713 1621 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AC104457.1-201ENST00000401024 814 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 FXNP2-201ENST00000411625 547 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 FAM8A4P-201ENST00000435433 1213 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AP001258.2-201ENST00000529891 490 ntBASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL27A1Q8IZC6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms