Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 SLED1-202ENST00000512051 380 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AC009084.3-201ENST00000623356 437 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 TUBB8P12-201ENST00000308911 1335 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 TUBB7P-202ENST00000428444 1305 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 TUBB8P7-204ENST00000567960 1332 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AC092364.2-201ENST00000596710 2692 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 AC132192.2-201ENST00000596206 1147 ntBASIC13.18□□□□□ -0.3
CSMD2Q7Z408 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.18□□□□□ -0.3
CSMD2Q7Z408 AC136604.1-201ENST00000418535 575 ntBASIC13.18□□□□□ -0.3
CSMD2Q7Z408 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 AC103988.2-201ENST00000561804 725 ntBASIC13.18□□□□□ -0.3
CSMD2Q7Z408 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 AC026316.1-201ENST00000398900 414 ntBASIC13.18□□□□□ -0.3
CSMD2Q7Z408 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD2Q7Z408 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 AC078925.2-201ENST00000624013 1973 ntBASIC13.17□□□□□ -0.3
CSMD2Q7Z408 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 AP003171.2-201ENST00000528208 925 ntBASIC13.17□□□□□ -0.3
CSMD2Q7Z408 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 AP005019.2-201ENST00000615104 511 ntBASIC13.17□□□□□ -0.3
CSMD2Q7Z408 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CSMD2Q7Z408 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms