Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.53□□□□□ -0.08
SHFQ7M4L6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHFQ7M4L6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHFQ7M4L6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SHFQ7M4L6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 EMBP1-201ENST00000458200 901 ntBASIC14.52□□□□□ -0.09
SHFQ7M4L6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 MIR4751-201ENST00000578027 74 ntBASIC14.52□□□□□ -0.09
SHFQ7M4L6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHFQ7M4L6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
SHFQ7M4L6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 HMGA1P7-201ENST00000406908 502 ntBASIC14.51□□□□□ -0.09
SHFQ7M4L6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 AL513480.1-201ENST00000451731 511 ntBASIC14.51□□□□□ -0.09
SHFQ7M4L6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 AC117500.6-201ENST00000624871 588 ntBASIC14.51□□□□□ -0.09
SHFQ7M4L6 FAM215A-202ENST00000632077 792 ntBASIC14.51□□□□□ -0.09
SHFQ7M4L6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 AC007686.3-201ENST00000619017 3487 ntBASIC14.51□□□□□ -0.09
SHFQ7M4L6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms