Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 BNIP3P1-202ENST00000550043 1585 ntBASIC15.34■□□□□ 0.05
RNF44Q7L0R7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 AL512361.1-201ENST00000554200 418 ntBASIC15.34■□□□□ 0.05
RNF44Q7L0R7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 AL096865.1-201ENST00000606796 927 ntBASIC15.34■□□□□ 0.05
RNF44Q7L0R7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 TNRC18P3-201ENST00000441896 2691 ntBASIC15.34■□□□□ 0.05
RNF44Q7L0R7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 KRT8P37-201ENST00000451609 1420 ntBASIC15.34■□□□□ 0.05
RNF44Q7L0R7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RNF44Q7L0R7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 AC134407.2-201ENST00000625089 1978 ntBASIC15.33■□□□□ 0.05
RNF44Q7L0R7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RNF44Q7L0R7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 FO393414.2-201ENST00000405153 598 ntBASIC15.33■□□□□ 0.04
RNF44Q7L0R7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC009477.1-201ENST00000452936 217 ntBASIC15.33■□□□□ 0.04
RNF44Q7L0R7 RN7SL618P-201ENST00000477850 296 ntBASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 ZNF890P-202ENST00000530367 1156 ntBASIC15.33■□□□□ 0.04
RNF44Q7L0R7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC010336.2-201ENST00000564226 506 ntBASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AJ011932.1-201ENST00000621707 465 ntBASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AL033527.5-202ENST00000641632 1098 ntBASIC15.33■□□□□ 0.04
RNF44Q7L0R7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms