Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 AC018529.1-201ENST00000613063 361 ntBASIC19.11■□□□□ 0.65
RNF20Q5VTR2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 FLJ16779-201ENST00000612722 7638 ntBASIC19.11■□□□□ 0.65
RNF20Q5VTR2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 RBPMS2P1-201ENST00000437762 623 ntBASIC19.1■□□□□ 0.65
RNF20Q5VTR2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.1■□□□□ 0.65
RNF20Q5VTR2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 AC009093.7-201ENST00000623853 1223 ntBASIC19.1■□□□□ 0.65
RNF20Q5VTR2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF20Q5VTR2 KRT8P37-201ENST00000451609 1420 ntBASIC19.09■□□□□ 0.65
RNF20Q5VTR2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 AC254562.1-201ENST00000417586 456 ntBASIC19.09■□□□□ 0.65
RNF20Q5VTR2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 AC023141.5-201ENST00000458585 616 ntBASIC19.09■□□□□ 0.65
RNF20Q5VTR2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF20Q5VTR2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF20Q5VTR2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF20Q5VTR2 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms