Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDCA8Q53HL2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 AC093726.1-201ENST00000608064 963 ntBASIC21.92■■□□□ 1.1
CDCA8Q53HL2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDCA8Q53HL2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 AC036164.1-201ENST00000570544 333 ntBASIC21.91■■□□□ 1.1
CDCA8Q53HL2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 AL391005.1-201ENST00000623953 2435 ntBASIC21.91■■□□□ 1.1
CDCA8Q53HL2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CDCA8Q53HL2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 KRT18P64-201ENST00000434946 1219 ntBASIC21.9■■□□□ 1.1
CDCA8Q53HL2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 CHCHD2P3-201ENST00000603038 451 ntBASIC21.9■■□□□ 1.1
CDCA8Q53HL2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDCA8Q53HL2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.89■■□□□ 1.1
CDCA8Q53HL2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDCA8Q53HL2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
CDCA8Q53HL2 AC026691.1-201ENST00000602502 2017 ntBASIC21.89■■□□□ 1.1
CDCA8Q53HL2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDCA8Q53HL2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDCA8Q53HL2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDCA8Q53HL2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC21.89■■□□□ 1.09
CDCA8Q53HL2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms