Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.52■□□□□ 0.4
BRCA2P51587 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCA2P51587 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCA2P51587 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.52■□□□□ 0.4
BRCA2P51587 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.52■□□□□ 0.4
BRCA2P51587 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.52■□□□□ 0.4
BRCA2P51587 AC107373.2-201ENST00000607735 490 ntBASIC17.52■□□□□ 0.4
BRCA2P51587 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRCA2P51587 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRCA2P51587 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.52■□□□□ 0.4
BRCA2P51587 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.52■□□□□ 0.4
BRCA2P51587 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.52■□□□□ 0.4
BRCA2P51587 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCA2P51587 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
BRCA2P51587 RN7SL8P-201ENST00000461771 266 ntBASIC17.52■□□□□ 0.4
BRCA2P51587 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.52■□□□□ 0.4
BRCA2P51587 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
BRCA2P51587 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRCA2P51587 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRCA2P51587 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.52■□□□□ 0.39
BRCA2P51587 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRCA2P51587 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRCA2P51587 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRCA2P51587 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
BRCA2P51587 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
BRCA2P51587 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.52■□□□□ 0.39
BRCA2P51587 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.52■□□□□ 0.39
BRCA2P51587 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.52■□□□□ 0.39
BRCA2P51587 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.52■□□□□ 0.39
BRCA2P51587 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.51■□□□□ 0.39
BRCA2P51587 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BRCA2P51587 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 KRT8P35-201ENST00000483942 1338 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
BRCA2P51587 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
BRCA2P51587 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 ACKR1-201ENST00000368121 1240 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.51■□□□□ 0.39
BRCA2P51587 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.51■□□□□ 0.39
BRCA2P51587 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.51■□□□□ 0.39
BRCA2P51587 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.51■□□□□ 0.39
BRCA2P51587 AC073413.1-201ENST00000603927 732 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 AP001065.2-201ENST00000617205 644 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 AC022748.3-201ENST00000621828 275 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BRCA2P51587 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 AC005915.1-201ENST00000624912 2018 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.51■□□□□ 0.39
BRCA2P51587 AC136604.1-201ENST00000418535 575 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 RN7SL818P-201ENST00000485099 259 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
BRCA2P51587 RN7SL725P-201ENST00000606439 259 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 AC105020.1-201ENST00000435356 2205 ntBASIC17.51■□□□□ 0.39
BRCA2P51587 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
BRCA2P51587 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRCA2P51587 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCA2P51587 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 AC093813.1-201ENST00000605066 256 ntBASIC17.5■□□□□ 0.39
BRCA2P51587 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCA2P51587 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCA2P51587 AP003171.2-201ENST00000528208 925 ntBASIC17.5■□□□□ 0.39
BRCA2P51587 AL359258.3-201ENST00000622910 2331 ntBASIC17.5■□□□□ 0.39
BRCA2P51587 TUBBP5-203ENST00000508529 1334 ntBASIC17.5■□□□□ 0.39
BRCA2P51587 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 AC022211.2-201ENST00000585075 2527 ntBASIC17.5■□□□□ 0.39
BRCA2P51587 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
BRCA2P51587 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BRCA2P51587 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
BRCA2P51587 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BRCA2P51587 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCA2P51587 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.5■□□□□ 0.39
BRCA2P51587 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms