Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC074338.1-201ENST00000416825 156 ntBASIC17.6■□□□□ 0.41
RFC5P40937 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 AC015922.1-201ENST00000421102 1152 ntBASIC17.6■□□□□ 0.41
RFC5P40937 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.6■□□□□ 0.41
RFC5P40937 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC5P40937 MEIS3P1-201ENST00000495167 958 ntBASIC17.6■□□□□ 0.41
RFC5P40937 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.6■□□□□ 0.41
RFC5P40937 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.6■□□□□ 0.41
RFC5P40937 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RFC5P40937 LINC01115-203ENST00000606068 577 ntBASIC17.6■□□□□ 0.41
RFC5P40937 AL662799.1-202ENST00000614205 422 ntBASIC17.6■□□□□ 0.41
RFC5P40937 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
RFC5P40937 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFC5P40937 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC5P40937 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.6■□□□□ 0.41
RFC5P40937 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.6■□□□□ 0.41
RFC5P40937 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RFC5P40937 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RFC5P40937 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFC5P40937 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFC5P40937 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFC5P40937 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RFC5P40937 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC5P40937 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 AC103702.1-201ENST00000548801 2630 ntBASIC17.59■□□□□ 0.41
RFC5P40937 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC5P40937 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC5P40937 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 SLC7A15P-201ENST00000424028 1363 ntBASIC17.59■□□□□ 0.41
RFC5P40937 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.59■□□□□ 0.41
RFC5P40937 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RFC5P40937 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC5P40937 AL589987.1-201ENST00000453380 819 ntBASIC17.59■□□□□ 0.41
RFC5P40937 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC5P40937 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC5P40937 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.59■□□□□ 0.41
RFC5P40937 AC055876.2-201ENST00000531834 546 ntBASIC17.59■□□□□ 0.41
RFC5P40937 API5-211ENST00000534695 560 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC5P40937 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.59■□□□□ 0.41
RFC5P40937 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
RFC5P40937 AC097359.3-201ENST00000603982 1210 ntBASIC17.59■□□□□ 0.41
RFC5P40937 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.59■□□□□ 0.41
RFC5P40937 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 LINC00554-201ENST00000564841 3011 ntBASIC17.59■□□□□ 0.41
RFC5P40937 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.59■□□□□ 0.41
RFC5P40937 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFC5P40937 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC5P40937 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.59■□□□□ 0.41
RFC5P40937 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFC5P40937 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
RFC5P40937 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFC5P40937 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.58■□□□□ 0.41
RFC5P40937 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RFC5P40937 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.58■□□□□ 0.41
RFC5P40937 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFC5P40937 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFC5P40937 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.58■□□□□ 0.41
RFC5P40937 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC5P40937 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC5P40937 AC008741.2-201ENST00000612792 3115 ntBASIC17.58■□□□□ 0.4
RFC5P40937 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RFC5P40937 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.58■□□□□ 0.4
RFC5P40937 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.58■□□□□ 0.4
RFC5P40937 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.58■□□□□ 0.4
RFC5P40937 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.58■□□□□ 0.4
RFC5P40937 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFC5P40937 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.58■□□□□ 0.4
RFC5P40937 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFC5P40937 AC099568.2-201ENST00000609194 695 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms