Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXC12P31275 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.24□□□□□ -0.13
HOXC12P31275 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HOXC12P31275 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXC12P31275 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXC12P31275 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXC12P31275 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXC12P31275 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXC12P31275 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HOXC12P31275 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HOXC12P31275 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
HOXC12P31275 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HOXC12P31275 PCDHA12-202ENST00000613593 2588 ntBASIC14.24□□□□□ -0.13
HOXC12P31275 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HOXC12P31275 CU639417.3-201ENST00000624240 1404 ntBASIC14.24□□□□□ -0.13
HOXC12P31275 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXC12P31275 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HOXC12P31275 ME2P1-201ENST00000426028 1970 ntBASIC14.23□□□□□ -0.13
HOXC12P31275 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXC12P31275 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXC12P31275 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXC12P31275 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 AGGF1P2-201ENST00000426656 2106 ntBASIC14.23□□□□□ -0.13
HOXC12P31275 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXC12P31275 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.23□□□□□ -0.13
HOXC12P31275 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HOXC12P31275 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.23□□□□□ -0.13
HOXC12P31275 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 MTND6P24-201ENST00000440466 518 ntBASIC14.23□□□□□ -0.13
HOXC12P31275 AC022494.1-201ENST00000466044 728 ntBASIC14.23□□□□□ -0.13
HOXC12P31275 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.23□□□□□ -0.13
HOXC12P31275 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.23□□□□□ -0.13
HOXC12P31275 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.23□□□□□ -0.13
HOXC12P31275 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.23□□□□□ -0.13
HOXC12P31275 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HOXC12P31275 FOXO1B-201ENST00000504678 1527 ntBASIC14.23□□□□□ -0.13
HOXC12P31275 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
HOXC12P31275 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.23□□□□□ -0.13
HOXC12P31275 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HOXC12P31275 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HOXC12P31275 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC12P31275 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXC12P31275 AC024909.3-201ENST00000611513 2257 ntBASIC14.22□□□□□ -0.13
HOXC12P31275 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXC12P31275 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC12P31275 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HOXC12P31275 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC12P31275 ALOX12P2-203ENST00000570921 1945 ntBASIC14.22□□□□□ -0.13
HOXC12P31275 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXC12P31275 ARSEP1-201ENST00000420443 635 ntBASIC14.22□□□□□ -0.13
HOXC12P31275 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXC12P31275 KRT17P7-201ENST00000451704 1104 ntBASIC14.22□□□□□ -0.13
HOXC12P31275 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HOXC12P31275 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXC12P31275 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXC12P31275 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.22□□□□□ -0.13
HOXC12P31275 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC12P31275 AL590560.3-201ENST00000623350 461 ntBASIC14.22□□□□□ -0.13
HOXC12P31275 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC12P31275 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXC12P31275 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXC12P31275 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
HOXC12P31275 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms