Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.69■□□□□ 0.42
CTGFP29279 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.69■□□□□ 0.42
CTGFP29279 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.69■□□□□ 0.42
CTGFP29279 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.69■□□□□ 0.42
CTGFP29279 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.69■□□□□ 0.42
CTGFP29279 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.69■□□□□ 0.42
CTGFP29279 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.69■□□□□ 0.42
CTGFP29279 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.69■□□□□ 0.42
CTGFP29279 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.69■□□□□ 0.42
CTGFP29279 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CTGFP29279 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.69■□□□□ 0.42
CTGFP29279 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTGFP29279 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.69■□□□□ 0.42
CTGFP29279 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.69■□□□□ 0.42
CTGFP29279 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CTGFP29279 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CTGFP29279 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTGFP29279 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.68■□□□□ 0.42
CTGFP29279 MIR769-201ENST00000390225 118 ntBASIC17.68■□□□□ 0.42
CTGFP29279 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.68■□□□□ 0.42
CTGFP29279 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.68■□□□□ 0.42
CTGFP29279 PRKXP1-201ENST00000561423 1122 ntBASIC17.68■□□□□ 0.42
CTGFP29279 AF254983.2-201ENST00000612331 135 ntBASIC17.68■□□□□ 0.42
CTGFP29279 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTGFP29279 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.67■□□□□ 0.42
CTGFP29279 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 AP001094.4-201ENST00000579008 2176 ntBASIC17.67■□□□□ 0.42
CTGFP29279 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 TPM3P8-201ENST00000330554 643 ntBASIC17.67■□□□□ 0.42
CTGFP29279 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CTGFP29279 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 AL133466.1-201ENST00000447582 150 ntBASIC17.67■□□□□ 0.42
CTGFP29279 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.67■□□□□ 0.42
CTGFP29279 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.67■□□□□ 0.42
CTGFP29279 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.67■□□□□ 0.42
CTGFP29279 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.67■□□□□ 0.42
CTGFP29279 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTGFP29279 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms