Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RXRBP28702 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 HCG27-204ENST00000424675 895 ntTSL 3 BASIC20.45■□□□□ 0.86
RXRBP28702 SERBP1P2-201ENST00000436888 1164 ntBASIC20.45■□□□□ 0.86
RXRBP28702 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.45■□□□□ 0.86
RXRBP28702 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.45■□□□□ 0.86
RXRBP28702 AC024293.1-201ENST00000467930 498 ntBASIC20.45■□□□□ 0.86
RXRBP28702 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
RXRBP28702 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.45■□□□□ 0.86
RXRBP28702 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.45■□□□□ 0.86
RXRBP28702 AL450472.2-201ENST00000603663 1156 ntBASIC20.45■□□□□ 0.86
RXRBP28702 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
RXRBP28702 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RXRBP28702 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RXRBP28702 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RXRBP28702 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.45■□□□□ 0.86
RXRBP28702 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.45■□□□□ 0.86
RXRBP28702 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RXRBP28702 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RXRBP28702 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RXRBP28702 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RXRBP28702 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC20.44■□□□□ 0.86
RXRBP28702 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC20.44■□□□□ 0.86
RXRBP28702 AC011247.3-201ENST00000603297 438 ntBASIC20.44■□□□□ 0.86
RXRBP28702 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RXRBP28702 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
RXRBP28702 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RXRBP28702 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RXRBP28702 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RXRBP28702 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 NHP2-202ENST00000314397 599 ntTSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 OR2K2-202ENST00000374428 1038 ntBASIC20.43■□□□□ 0.86
RXRBP28702 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC20.43■□□□□ 0.86
RXRBP28702 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.43■□□□□ 0.86
RXRBP28702 BRI3P1-201ENST00000440440 378 ntBASIC20.43■□□□□ 0.86
RXRBP28702 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 RN7SL67P-201ENST00000492147 296 ntBASIC20.43■□□□□ 0.86
RXRBP28702 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.43■□□□□ 0.86
RXRBP28702 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.43■□□□□ 0.86
RXRBP28702 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.43■□□□□ 0.86
RXRBP28702 SNORD3B-2-202ENST00000571722 791 ntBASIC20.43■□□□□ 0.86
RXRBP28702 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 LINC00431-202ENST00000636375 159 ntBASIC20.43■□□□□ 0.86
RXRBP28702 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RXRBP28702 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RXRBP28702 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRBP28702 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRBP28702 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RXRBP28702 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.42■□□□□ 0.86
RXRBP28702 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RXRBP28702 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.42■□□□□ 0.86
RXRBP28702 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRBP28702 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.42■□□□□ 0.86
RXRBP28702 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms