Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 REXO1L1P-202ENST00000608646 1974 ntBASIC16.15■□□□□ 0.18
HLA-DPA1P20036 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 TSEN15P1-201ENST00000423257 515 ntBASIC16.15■□□□□ 0.18
HLA-DPA1P20036 KRT8P37-201ENST00000451609 1420 ntBASIC16.15■□□□□ 0.18
HLA-DPA1P20036 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 AC092183.1-201ENST00000469884 875 ntBASIC16.15■□□□□ 0.18
HLA-DPA1P20036 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DPA1P20036 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DPA1P20036 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.18
HLA-DPA1P20036 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 AC069262.1-201ENST00000539058 672 ntBASIC16.14■□□□□ 0.17
HLA-DPA1P20036 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DPA1P20036 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DPA1P20036 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms