Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.22■□□□□ 0.67
APPP05067 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.22■□□□□ 0.67
APPP05067 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.22■□□□□ 0.67
APPP05067 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.22■□□□□ 0.67
APPP05067 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APPP05067 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APPP05067 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.22■□□□□ 0.67
APPP05067 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
APPP05067 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.22■□□□□ 0.67
APPP05067 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC19.22■□□□□ 0.67
APPP05067 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
APPP05067 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.21■□□□□ 0.67
APPP05067 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
APPP05067 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.21■□□□□ 0.67
APPP05067 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.21■□□□□ 0.67
APPP05067 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 AL080243.2-201ENST00000418783 582 ntBASIC19.21■□□□□ 0.67
APPP05067 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APPP05067 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.21■□□□□ 0.67
APPP05067 BNIP3P1-202ENST00000550043 1585 ntBASIC19.21■□□□□ 0.67
APPP05067 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.21■□□□□ 0.67
APPP05067 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.21■□□□□ 0.67
APPP05067 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.21■□□□□ 0.67
APPP05067 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APPP05067 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
APPP05067 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 KRT8P12-202ENST00000472924 1397 ntBASIC19.2■□□□□ 0.66
APPP05067 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
APPP05067 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.2■□□□□ 0.66
APPP05067 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.2■□□□□ 0.66
APPP05067 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.2■□□□□ 0.66
APPP05067 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.2■□□□□ 0.66
APPP05067 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.2■□□□□ 0.66
APPP05067 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.2■□□□□ 0.66
APPP05067 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.2■□□□□ 0.66
APPP05067 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
APPP05067 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
APPP05067 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
APPP05067 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
APPP05067 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APPP05067 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.2■□□□□ 0.66
APPP05067 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
APPP05067 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
APPP05067 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
APPP05067 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.19■□□□□ 0.66
APPP05067 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
APPP05067 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.19■□□□□ 0.66
APPP05067 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.19■□□□□ 0.66
APPP05067 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.19■□□□□ 0.66
APPP05067 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.19■□□□□ 0.66
APPP05067 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.19■□□□□ 0.66
APPP05067 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.19■□□□□ 0.66
APPP05067 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.19■□□□□ 0.66
APPP05067 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.19■□□□□ 0.66
APPP05067 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APPP05067 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms