Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 AC026691.1-201ENST00000602502 2017 ntBASIC19■□□□□ 0.63
MBD4O95243 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MBD4O95243 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MBD4O95243 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19■□□□□ 0.63
MBD4O95243 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MBD4O95243 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19■□□□□ 0.63
MBD4O95243 DFFBP1-201ENST00000433250 979 ntBASIC19■□□□□ 0.63
MBD4O95243 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MBD4O95243 CD81-207ENST00000481687 890 ntTSL 2 BASIC19■□□□□ 0.63
MBD4O95243 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MBD4O95243 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19■□□□□ 0.63
MBD4O95243 AC093004.1-201ENST00000508850 424 ntBASIC19■□□□□ 0.63
MBD4O95243 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MBD4O95243 TIMM17BP1-201ENST00000545713 516 ntBASIC19■□□□□ 0.63
MBD4O95243 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19■□□□□ 0.63
MBD4O95243 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MBD4O95243 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19■□□□□ 0.63
MBD4O95243 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MBD4O95243 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MBD4O95243 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD4O95243 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MBD4O95243 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD4O95243 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MBD4O95243 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD4O95243 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MBD4O95243 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD4O95243 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 PCDHA1-201ENST00000378133 2726 ntBASIC18.98■□□□□ 0.63
MBD4O95243 SLC7A15P-201ENST00000424028 1363 ntBASIC18.98■□□□□ 0.63
MBD4O95243 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.98■□□□□ 0.63
MBD4O95243 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD4O95243 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.98■□□□□ 0.63
MBD4O95243 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 AP005018.1-201ENST00000525475 301 ntBASIC18.98■□□□□ 0.63
MBD4O95243 MIR4313-201ENST00000580760 101 ntBASIC18.98■□□□□ 0.63
MBD4O95243 CHCHD2P3-201ENST00000603038 451 ntBASIC18.98■□□□□ 0.63
MBD4O95243 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
MBD4O95243 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MBD4O95243 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD4O95243 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD4O95243 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD4O95243 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms