Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM4O75871 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM4O75871 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM4O75871 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM4O75871 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM4O75871 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.38□□□□□ -0.11
CEACAM4O75871 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CEACAM4O75871 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CEACAM4O75871 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 GPAA1P2-201ENST00000417923 928 ntBASIC14.37□□□□□ -0.11
CEACAM4O75871 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.37□□□□□ -0.11
CEACAM4O75871 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.37□□□□□ -0.11
CEACAM4O75871 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CEACAM4O75871 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CEACAM4O75871 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.37□□□□□ -0.11
CEACAM4O75871 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.37□□□□□ -0.11
CEACAM4O75871 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.37□□□□□ -0.11
CEACAM4O75871 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.37□□□□□ -0.11
CEACAM4O75871 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
CEACAM4O75871 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM4O75871 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM4O75871 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CEACAM4O75871 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.36□□□□□ -0.11
CEACAM4O75871 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.36□□□□□ -0.11
CEACAM4O75871 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.36□□□□□ -0.11
CEACAM4O75871 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.36□□□□□ -0.11
CEACAM4O75871 FAM86HP-204ENST00000513466 959 ntBASIC14.36□□□□□ -0.11
CEACAM4O75871 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.36□□□□□ -0.11
CEACAM4O75871 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.36□□□□□ -0.11
CEACAM4O75871 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.36□□□□□ -0.11
CEACAM4O75871 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 MIR3615-201ENST00000581999 87 ntBASIC14.36□□□□□ -0.11
CEACAM4O75871 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.36□□□□□ -0.11
CEACAM4O75871 AL139099.5-201ENST00000635274 300 ntBASIC14.36□□□□□ -0.11
CEACAM4O75871 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CEACAM4O75871 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 AC005052.1-201ENST00000625181 2492 ntBASIC14.36□□□□□ -0.11
CEACAM4O75871 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CEACAM4O75871 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM4O75871 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
CEACAM4O75871 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.35□□□□□ -0.11
CEACAM4O75871 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.35□□□□□ -0.11
CEACAM4O75871 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CEACAM4O75871 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CEACAM4O75871 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CEACAM4O75871 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.35□□□□□ -0.11
CEACAM4O75871 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM4O75871 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms