Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPS15-208ENST00000591804 711 ntTSL 5 BASIC26.74■■□□□ 1.87
CUX2O14529 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC26.74■■□□□ 1.87
CUX2O14529 AL132780.4-201ENST00000624870 1135 ntBASIC26.74■■□□□ 1.87
CUX2O14529 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CUX2O14529 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC26.73■■□□□ 1.87
CUX2O14529 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CUX2O14529 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC26.73■■□□□ 1.87
CUX2O14529 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CUX2O14529 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CUX2O14529 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CUX2O14529 AL691432.1-201ENST00000596308 1422 ntBASIC26.73■■□□□ 1.87
CUX2O14529 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CUX2O14529 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CUX2O14529 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CUX2O14529 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC26.73■■□□□ 1.87
CUX2O14529 ELP6-209ENST00000446787 894 ntTSL 3 BASIC26.73■■□□□ 1.87
CUX2O14529 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CUX2O14529 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CUX2O14529 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC26.72■■□□□ 1.87
CUX2O14529 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
CUX2O14529 KRT8P29-201ENST00000420409 1371 ntBASIC26.72■■□□□ 1.87
CUX2O14529 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
CUX2O14529 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
CUX2O14529 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 AC004987.2-201ENST00000395959 1148 ntBASIC26.72■■□□□ 1.87
CUX2O14529 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC26.72■■□□□ 1.87
CUX2O14529 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC26.72■■□□□ 1.87
CUX2O14529 BNIP3P13-201ENST00000599968 566 ntBASIC26.72■■□□□ 1.87
CUX2O14529 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC26.72■■□□□ 1.87
CUX2O14529 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CUX2O14529 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CUX2O14529 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC26.72■■□□□ 1.87
CUX2O14529 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CUX2O14529 AC005622.1-201ENST00000636801 1703 ntBASIC26.71■■□□□ 1.87
CUX2O14529 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CUX2O14529 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC26.71■■□□□ 1.87
CUX2O14529 AC141586.5-201ENST00000624546 2050 ntBASIC26.71■■□□□ 1.87
CUX2O14529 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CUX2O14529 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CUX2O14529 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CUX2O14529 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC26.71■■□□□ 1.87
CUX2O14529 FAM86KP-201ENST00000509817 987 ntBASIC26.71■■□□□ 1.87
CUX2O14529 SCARNA21-201ENST00000517026 139 ntBASIC26.71■■□□□ 1.87
CUX2O14529 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC26.71■■□□□ 1.87
CUX2O14529 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC26.71■■□□□ 1.87
CUX2O14529 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC26.71■■□□□ 1.87
CUX2O14529 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC26.71■■□□□ 1.87
CUX2O14529 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC26.71■■□□□ 1.87
CUX2O14529 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC26.71■■□□□ 1.87
CUX2O14529 AC233280.19-201ENST00000633223 136 ntBASIC26.71■■□□□ 1.87
CUX2O14529 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CUX2O14529 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC26.71■■□□□ 1.87
CUX2O14529 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CUX2O14529 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC26.71■■□□□ 1.87
CUX2O14529 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CUX2O14529 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
CUX2O14529 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
CUX2O14529 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC26.7■■□□□ 1.87
CUX2O14529 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC26.7■■□□□ 1.87
CUX2O14529 AGPAT5P1-201ENST00000455855 1019 ntBASIC26.7■■□□□ 1.87
CUX2O14529 AC007881.3-201ENST00000608897 607 ntBASIC26.7■■□□□ 1.87
CUX2O14529 MIR6858-201ENST00000620733 67 ntBASIC26.7■■□□□ 1.87
CUX2O14529 MME-218ENST00000625667 363 ntTSL 5 BASIC26.7■■□□□ 1.87
CUX2O14529 TK1-203ENST00000588734 1681 ntTSL 2 BASIC26.7■■□□□ 1.86
CUX2O14529 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CUX2O14529 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
CUX2O14529 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC26.7■■□□□ 1.86
CUX2O14529 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CUX2O14529 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC26.69■■□□□ 1.86
CUX2O14529 AL157791.1-201ENST00000553667 1699 ntBASIC26.69■■□□□ 1.86
CUX2O14529 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CUX2O14529 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CUX2O14529 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CUX2O14529 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC26.69■■□□□ 1.86
CUX2O14529 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CUX2O14529 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC26.69■■□□□ 1.86
CUX2O14529 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC26.69■■□□□ 1.86
CUX2O14529 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CUX2O14529 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC26.69■■□□□ 1.86
CUX2O14529 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC26.69■■□□□ 1.86
CUX2O14529 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
CUX2O14529 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CUX2O14529 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC26.69■■□□□ 1.86
CUX2O14529 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC26.69■■□□□ 1.86
CUX2O14529 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CUX2O14529 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC26.69■■□□□ 1.86
CUX2O14529 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CUX2O14529 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CUX2O14529 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms