Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C1QTNF3-AMACRE9PGA6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 MTHFR-217ENST00000641820 1569 ntBASIC15.96■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.96■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.96■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AC079328.2-201ENST00000561241 3354 ntBASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AC136604.1-201ENST00000418535 575 ntBASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 HNRNPUP1-201ENST00000554987 333 ntBASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AL158212.4-201ENST00000624062 1286 ntBASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 CLK3P2-201ENST00000427566 1453 ntBASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.95■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 FLJ16779-201ENST00000612722 7638 ntBASIC15.94■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 AC011477.6-201ENST00000604980 1927 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms