Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 ZACNP1-201ENST00000612259 710 ntBASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM88BA6NKF7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 REXO1L1P-202ENST00000608646 1974 ntBASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 AL157792.1-201ENST00000488281 530 ntBASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 AC008764.6-201ENST00000595909 2069 ntBASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM88BA6NKF7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 AL133267.1-201ENST00000398220 340 ntBASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 RN7SL163P-201ENST00000583100 276 ntBASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 BNIP3P13-201ENST00000599968 566 ntBASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 AC004923.1-202ENST00000642106 209 ntBASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM88BA6NKF7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 PDIA3P2-201ENST00000428073 158 ntBASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 RPL7P35-201ENST00000446943 740 ntBASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 RPL18P13-201ENST00000478088 569 ntBASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 AC010234.1-201ENST00000494599 870 ntBASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 AC100850.1-201ENST00000506768 649 ntBASIC18.22■□□□□ 0.51
TMEM88BA6NKF7 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms