Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AC093724.1-201ENST00000448659 1027 ntBASIC13.72□□□□□ -0.21
TMEM235A6NFC5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AC136632.2-201ENST00000512891 861 ntBASIC13.72□□□□□ -0.21
TMEM235A6NFC5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AC021087.4-201ENST00000563761 564 ntBASIC13.72□□□□□ -0.21
TMEM235A6NFC5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.72□□□□□ -0.21
TMEM235A6NFC5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AL358472.4-201ENST00000633140 710 ntBASIC13.72□□□□□ -0.21
TMEM235A6NFC5 AC107918.4-202ENST00000641623 219 ntBASIC13.72□□□□□ -0.21
TMEM235A6NFC5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.72□□□□□ -0.21
TMEM235A6NFC5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM235A6NFC5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 CICP23-201ENST00000605013 2741 ntBASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC026748.1-201ENST00000624349 3251 ntBASIC13.71□□□□□ -0.21
TMEM235A6NFC5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 KRT18P27-201ENST00000427733 1299 ntBASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC245100.5-201ENST00000452108 331 ntBASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC008667.4-201ENST00000607370 168 ntBASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM235A6NFC5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms