Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC162PA2VCL2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCDC162PA2VCL2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC162PA2VCL2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.05■□□□□ 0.16
CCDC162PA2VCL2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC162PA2VCL2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC162PA2VCL2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC162PA2VCL2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 KRT18P13-201ENST00000400056 1290 ntBASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC162PA2VCL2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AC004987.2-201ENST00000395959 1148 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AC254562.1-201ENST00000417586 456 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 CNN2P11-201ENST00000429351 262 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 SPDYE14P-201ENST00000442619 822 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AP006288.1-201ENST00000446065 395 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AC004967.1-201ENST00000453589 447 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AC023141.5-201ENST00000458585 616 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AC026150.2-201ENST00000564693 1156 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 AC009093.7-201ENST00000623853 1223 ntBASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC162PA2VCL2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC162PA2VCL2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC162PA2VCL2 LINC02228-204ENST00000642115 2962 ntBASIC16.02■□□□□ 0.16
CCDC162PA2VCL2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC162PA2VCL2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCDC162PA2VCL2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms