Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 C1QBPP1-201ENST00000400117 770 ntBASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AL049840.4-201ENST00000602422 811 ntBASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 HLA-A-202ENST00000376806 1854 ntBASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 AC005915.1-201ENST00000624912 2018 ntBASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 FER1L4-210ENST00000615531 5998 ntBASIC15.08■□□□□ 0.01
CCDC187A0A096LP49 AL391005.1-201ENST00000623953 2435 ntBASIC15.08■□□□□ 0.01
CCDC187A0A096LP49 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC187A0A096LP49 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC187A0A096LP49 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC187A0A096LP49 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC187A0A096LP49 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AC007551.1-201ENST00000457394 519 ntBASIC15.08■□□□□ 0
CCDC187A0A096LP49 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AP000812.2-201ENST00000538934 718 ntBASIC15.08■□□□□ 0
CCDC187A0A096LP49 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AC022211.2-201ENST00000585075 2527 ntBASIC15.08■□□□□ 0
CCDC187A0A096LP49 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.08■□□□□ 0
CCDC187A0A096LP49 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC187A0A096LP49 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC187A0A096LP49 BAATP1-201ENST00000412284 1225 ntBASIC15.07■□□□□ 0
CCDC187A0A096LP49 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.07■□□□□ 0
CCDC187A0A096LP49 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms