Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AC117489.1-201ENST00000625169 3217 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 TOB2P1-201ENST00000469761 992 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AL160237.2-201ENST00000556165 472 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AL022326.1-202ENST00000641533 845 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 GRK6P1-201ENST00000400595 1711 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 LINC00552-201ENST00000625151 2579 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AC232323.1-201ENST00000540724 2099 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 REXO1L5P-201ENST00000622260 2098 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 AC092127.1-201ENST00000567093 3455 ntBASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 HCG4-201ENST00000418983 998 ntBASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 POM121L3P-201ENST00000419331 1163 ntBASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 PI4KAP1-204ENST00000612579 1703 ntBASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 AC013726.1-201ENST00000563747 2285 ntBASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 AC011477.6-201ENST00000604980 1927 ntBASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RCL1Q9Y2P8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms