Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 AC074044.1-201ENST00000609673 707 ntBASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 LINC02447-202ENST00000501888 2146 ntBASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 LINC02199-201ENST00000506655 2702 ntBASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20BQ9P0W2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 AC025048.6-201ENST00000634326 1161 ntBASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20BQ9P0W2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 Z97205.2-201ENST00000564697 1639 ntBASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 AC092337.1-201ENST00000568699 1129 ntBASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 AC112504.1-201ENST00000623415 1841 ntBASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20BQ9P0W2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
HMG20BQ9P0W2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms